Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
MT-ND3P03897 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND3P03897 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND3P03897 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.63■□□□□ 0.57
MT-ND3P03897 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND3P03897 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
MT-ND3P03897 REXO1L9P-201ENST00000604264 2108 ntBASIC18.62■□□□□ 0.57
MT-ND3P03897 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND3P03897 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.62■□□□□ 0.57
MT-ND3P03897 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND3P03897 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND3P03897 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND3P03897 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.62■□□□□ 0.57
MT-ND3P03897 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND3P03897 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND3P03897 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND3P03897 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.62■□□□□ 0.57
MT-ND3P03897 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
MT-ND3P03897 PRSS44-201ENST00000515154 1146 ntBASIC18.62■□□□□ 0.57
MT-ND3P03897 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.62■□□□□ 0.57
MT-ND3P03897 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND3P03897 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.62■□□□□ 0.57
MT-ND3P03897 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.62■□□□□ 0.57
MT-ND3P03897 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.62■□□□□ 0.57
MT-ND3P03897 AP000525.1-201ENST00000608286 694 ntBASIC18.62■□□□□ 0.57
MT-ND3P03897 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.62■□□□□ 0.57
MT-ND3P03897 AL445675.2-201ENST00000620291 557 ntBASIC18.62■□□□□ 0.57
MT-ND3P03897 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.62■□□□□ 0.57
MT-ND3P03897 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND3P03897 FSCN1P1-201ENST00000568912 1481 ntBASIC18.62■□□□□ 0.57
MT-ND3P03897 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND3P03897 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND3P03897 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND3P03897 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND3P03897 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND3P03897 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.62■□□□□ 0.57
MT-ND3P03897 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
MT-ND3P03897 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND3P03897 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
MT-ND3P03897 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND3P03897 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MT-ND3P03897 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.61■□□□□ 0.57
MT-ND3P03897 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.61■□□□□ 0.57
MT-ND3P03897 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
MT-ND3P03897 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND3P03897 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.61■□□□□ 0.57
MT-ND3P03897 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
MT-ND3P03897 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND3P03897 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND3P03897 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND3P03897 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND3P03897 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND3P03897 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND3P03897 MIR1238-201ENST00000408483 83 ntBASIC18.61■□□□□ 0.57
MT-ND3P03897 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.61■□□□□ 0.57
MT-ND3P03897 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.61■□□□□ 0.57
MT-ND3P03897 FITM1-202ENST00000559294 800 ntBASIC18.61■□□□□ 0.57
MT-ND3P03897 NAPSB-206ENST00000562112 1266 ntBASIC18.61■□□□□ 0.57
MT-ND3P03897 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.61■□□□□ 0.57
MT-ND3P03897 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MT-ND3P03897 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MT-ND3P03897 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
MT-ND3P03897 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND3P03897 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
MT-ND3P03897 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND3P03897 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND3P03897 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND3P03897 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND3P03897 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND3P03897 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND3P03897 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.6■□□□□ 0.57
MT-ND3P03897 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
MT-ND3P03897 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.6■□□□□ 0.57
MT-ND3P03897 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND3P03897 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND3P03897 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND3P03897 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
MT-ND3P03897 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND3P03897 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
MT-ND3P03897 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.6■□□□□ 0.57
MT-ND3P03897 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.6■□□□□ 0.57
MT-ND3P03897 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND3P03897 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND3P03897 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
MT-ND3P03897 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
MT-ND3P03897 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.6■□□□□ 0.57
MT-ND3P03897 RCN1P1-201ENST00000400413 996 ntBASIC18.6■□□□□ 0.57
MT-ND3P03897 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.6■□□□□ 0.57
MT-ND3P03897 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND3P03897 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.6■□□□□ 0.57
MT-ND3P03897 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
MT-ND3P03897 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND3P03897 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.6■□□□□ 0.57
MT-ND3P03897 AC005363.2-201ENST00000618631 242 ntBASIC18.6■□□□□ 0.57
MT-ND3P03897 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.6■□□□□ 0.57
MT-ND3P03897 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.6■□□□□ 0.57
MT-ND3P03897 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND3P03897 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND3P03897 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND3P03897 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms