Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TIMP1P01033 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.66■□□□□ 0.74
TIMP1P01033 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TIMP1P01033 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TIMP1P01033 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TIMP1P01033 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.66■□□□□ 0.74
TIMP1P01033 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TIMP1P01033 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TIMP1P01033 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TIMP1P01033 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TIMP1P01033 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TIMP1P01033 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TIMP1P01033 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.65■□□□□ 0.74
TIMP1P01033 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.65■□□□□ 0.74
TIMP1P01033 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TIMP1P01033 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.65■□□□□ 0.74
TIMP1P01033 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.65■□□□□ 0.74
TIMP1P01033 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.65■□□□□ 0.74
TIMP1P01033 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TIMP1P01033 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
TIMP1P01033 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.65■□□□□ 0.74
TIMP1P01033 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TIMP1P01033 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TIMP1P01033 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TIMP1P01033 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TIMP1P01033 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TIMP1P01033 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.65■□□□□ 0.74
TIMP1P01033 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TIMP1P01033 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TIMP1P01033 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TIMP1P01033 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TIMP1P01033 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
TIMP1P01033 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.64■□□□□ 0.73
TIMP1P01033 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.64■□□□□ 0.73
TIMP1P01033 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.64■□□□□ 0.73
TIMP1P01033 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TIMP1P01033 HTR5BP-201ENST00000430851 1154 ntBASIC19.64■□□□□ 0.73
TIMP1P01033 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.64■□□□□ 0.73
TIMP1P01033 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
TIMP1P01033 AC136632.2-201ENST00000512891 861 ntBASIC19.64■□□□□ 0.73
TIMP1P01033 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TIMP1P01033 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TIMP1P01033 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.64■□□□□ 0.73
TIMP1P01033 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.64■□□□□ 0.73
TIMP1P01033 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.64■□□□□ 0.73
TIMP1P01033 AC002310.6-201ENST00000624451 1377 ntBASIC19.64■□□□□ 0.73
TIMP1P01033 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TIMP1P01033 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TIMP1P01033 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.64■□□□□ 0.73
TIMP1P01033 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.64■□□□□ 0.73
TIMP1P01033 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TIMP1P01033 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TIMP1P01033 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TIMP1P01033 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TIMP1P01033 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TIMP1P01033 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TIMP1P01033 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIMP1P01033 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.63■□□□□ 0.73
TIMP1P01033 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIMP1P01033 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TIMP1P01033 LINC01126-201ENST00000623515 1646 ntBASIC19.63■□□□□ 0.73
TIMP1P01033 PMPCAP1-201ENST00000508114 1576 ntBASIC19.63■□□□□ 0.73
TIMP1P01033 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIMP1P01033 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.63■□□□□ 0.73
TIMP1P01033 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIMP1P01033 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIMP1P01033 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.63■□□□□ 0.73
TIMP1P01033 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
TIMP1P01033 AL645939.2-201ENST00000427340 991 ntBASIC19.63■□□□□ 0.73
TIMP1P01033 PRYP5-201ENST00000451909 266 ntBASIC19.63■□□□□ 0.73
TIMP1P01033 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TIMP1P01033 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.63■□□□□ 0.73
TIMP1P01033 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.63■□□□□ 0.73
TIMP1P01033 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.63■□□□□ 0.73
TIMP1P01033 AC073592.4-201ENST00000623827 446 ntBASIC19.63■□□□□ 0.73
TIMP1P01033 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.63■□□□□ 0.73
TIMP1P01033 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIMP1P01033 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.63■□□□□ 0.73
TIMP1P01033 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIMP1P01033 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIMP1P01033 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIMP1P01033 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.63■□□□□ 0.73
TIMP1P01033 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIMP1P01033 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TIMP1P01033 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TIMP1P01033 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TIMP1P01033 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TIMP1P01033 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TIMP1P01033 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TIMP1P01033 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.62■□□□□ 0.73
TIMP1P01033 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TIMP1P01033 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.62■□□□□ 0.73
TIMP1P01033 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
TIMP1P01033 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TIMP1P01033 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TIMP1P01033 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TIMP1P01033 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TIMP1P01033 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TIMP1P01033 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TIMP1P01033 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms