Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.74■□□□□ 0.91
ALDH1A1P00352 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.74■□□□□ 0.91
ALDH1A1P00352 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALDH1A1P00352 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALDH1A1P00352 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALDH1A1P00352 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ALDH1A1P00352 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.74■□□□□ 0.91
ALDH1A1P00352 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ALDH1A1P00352 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALDH1A1P00352 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALDH1A1P00352 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ALDH1A1P00352 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.74■□□□□ 0.91
ALDH1A1P00352 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.74■□□□□ 0.91
ALDH1A1P00352 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ALDH1A1P00352 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.74■□□□□ 0.91
ALDH1A1P00352 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ALDH1A1P00352 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALDH1A1P00352 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ALDH1A1P00352 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALDH1A1P00352 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.74■□□□□ 0.91
ALDH1A1P00352 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.74■□□□□ 0.91
ALDH1A1P00352 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.73■□□□□ 0.91
ALDH1A1P00352 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.73■□□□□ 0.91
ALDH1A1P00352 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALDH1A1P00352 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALDH1A1P00352 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ALDH1A1P00352 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ALDH1A1P00352 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ALDH1A1P00352 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALDH1A1P00352 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.73■□□□□ 0.91
ALDH1A1P00352 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
ALDH1A1P00352 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.73■□□□□ 0.91
ALDH1A1P00352 CEND1P1-201ENST00000451006 455 ntBASIC20.73■□□□□ 0.91
ALDH1A1P00352 LHX6-205ENST00000464484 666 ntTSL 2 BASIC20.73■□□□□ 0.91
ALDH1A1P00352 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.73■□□□□ 0.91
ALDH1A1P00352 AC112698.1-201ENST00000510299 916 ntBASIC20.73■□□□□ 0.91
ALDH1A1P00352 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
ALDH1A1P00352 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
ALDH1A1P00352 AC092865.6-201ENST00000642101 219 ntBASIC20.73■□□□□ 0.91
ALDH1A1P00352 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALDH1A1P00352 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALDH1A1P00352 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALDH1A1P00352 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ALDH1A1P00352 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALDH1A1P00352 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
ALDH1A1P00352 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ALDH1A1P00352 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALDH1A1P00352 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALDH1A1P00352 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.72■□□□□ 0.91
ALDH1A1P00352 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ALDH1A1P00352 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALDH1A1P00352 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.72■□□□□ 0.91
ALDH1A1P00352 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.72■□□□□ 0.91
ALDH1A1P00352 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
ALDH1A1P00352 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ALDH1A1P00352 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALDH1A1P00352 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALDH1A1P00352 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALDH1A1P00352 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ALDH1A1P00352 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ALDH1A1P00352 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ALDH1A1P00352 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.72■□□□□ 0.91
ALDH1A1P00352 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ALDH1A1P00352 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALDH1A1P00352 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALDH1A1P00352 PMPCAP1-201ENST00000508114 1576 ntBASIC20.72■□□□□ 0.91
ALDH1A1P00352 SDHAP2-201ENST00000455183 2001 ntBASIC20.71■□□□□ 0.91
ALDH1A1P00352 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
ALDH1A1P00352 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ALDH1A1P00352 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ALDH1A1P00352 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.71■□□□□ 0.91
ALDH1A1P00352 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.71■□□□□ 0.91
ALDH1A1P00352 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ALDH1A1P00352 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ALDH1A1P00352 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ALDH1A1P00352 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.71■□□□□ 0.91
ALDH1A1P00352 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.71■□□□□ 0.91
ALDH1A1P00352 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.71■□□□□ 0.91
ALDH1A1P00352 AL096865.1-201ENST00000606796 927 ntBASIC20.71■□□□□ 0.91
ALDH1A1P00352 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.71■□□□□ 0.91
ALDH1A1P00352 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
ALDH1A1P00352 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ALDH1A1P00352 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ALDH1A1P00352 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ALDH1A1P00352 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ALDH1A1P00352 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.71■□□□□ 0.91
ALDH1A1P00352 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
ALDH1A1P00352 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ALDH1A1P00352 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ALDH1A1P00352 AC092667.1-201ENST00000434301 2586 ntBASIC20.7■□□□□ 0.9
ALDH1A1P00352 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ALDH1A1P00352 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
ALDH1A1P00352 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ALDH1A1P00352 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ALDH1A1P00352 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ALDH1A1P00352 HLA-J-203ENST00000494367 1087 ntBASIC20.7■□□□□ 0.9
ALDH1A1P00352 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.7■□□□□ 0.9
ALDH1A1P00352 AL589182.2-201ENST00000619332 1049 ntBASIC20.7■□□□□ 0.9
ALDH1A1P00352 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
ALDH1A1P00352 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms