Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN1O95832 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN1O95832 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN1O95832 RPSAP43-201ENST00000402237 625 ntBASIC16.29■□□□□ 0.2
CLDN1O95832 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN1O95832 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN1O95832 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN1O95832 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN1O95832 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.29■□□□□ 0.2
CLDN1O95832 AC008608.2-201ENST00000606089 416 ntBASIC16.29■□□□□ 0.2
CLDN1O95832 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN1O95832 AC010240.3-201ENST00000607688 395 ntBASIC16.29■□□□□ 0.2
CLDN1O95832 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN1O95832 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN1O95832 AC116407.3-201ENST00000623905 1129 ntBASIC16.29■□□□□ 0.2
CLDN1O95832 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN1O95832 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN1O95832 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN1O95832 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CLDN1O95832 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN1O95832 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLDN1O95832 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN1O95832 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN1O95832 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN1O95832 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN1O95832 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN1O95832 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CLDN1O95832 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN1O95832 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN1O95832 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CLDN1O95832 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN1O95832 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLDN1O95832 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CLDN1O95832 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CLDN1O95832 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN1O95832 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN1O95832 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN1O95832 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN1O95832 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLDN1O95832 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN1O95832 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN1O95832 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLDN1O95832 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN1O95832 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN1O95832 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN1O95832 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN1O95832 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN1O95832 IGHGP-201ENST00000390555 1178 ntBASIC16.28■□□□□ 0.2
CLDN1O95832 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN1O95832 POM121L3P-201ENST00000419331 1163 ntBASIC16.28■□□□□ 0.2
CLDN1O95832 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN1O95832 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN1O95832 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
CLDN1O95832 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.28■□□□□ 0.2
CLDN1O95832 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.28■□□□□ 0.2
CLDN1O95832 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.28■□□□□ 0.2
CLDN1O95832 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN1O95832 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.28■□□□□ 0.2
CLDN1O95832 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN1O95832 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN1O95832 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN1O95832 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN1O95832 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN1O95832 AC104417.2-201ENST00000562989 1793 ntBASIC16.28■□□□□ 0.2
CLDN1O95832 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN1O95832 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CLDN1O95832 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CLDN1O95832 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN1O95832 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN1O95832 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN1O95832 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN1O95832 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CLDN1O95832 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN1O95832 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN1O95832 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN1O95832 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN1O95832 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN1O95832 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN1O95832 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN1O95832 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN1O95832 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN1O95832 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN1O95832 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN1O95832 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN1O95832 GPX1P2-201ENST00000429271 606 ntBASIC16.27■□□□□ 0.2
CLDN1O95832 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.27■□□□□ 0.2
CLDN1O95832 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.27■□□□□ 0.2
CLDN1O95832 MIR5100-201ENST00000579544 119 ntBASIC16.27■□□□□ 0.2
CLDN1O95832 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.27■□□□□ 0.2
CLDN1O95832 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN1O95832 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.27■□□□□ 0.2
CLDN1O95832 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN1O95832 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN1O95832 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN1O95832 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN1O95832 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN1O95832 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.27■□□□□ 0.19
CLDN1O95832 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN1O95832 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN1O95832 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms