Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.46■□□□□ 0.87
GGPS1O95749 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 NUS1P2-201ENST00000417358 873 ntBASIC20.46■□□□□ 0.87
GGPS1O95749 TSPY12P-201ENST00000421279 868 ntBASIC20.46■□□□□ 0.87
GGPS1O95749 AC079781.3-201ENST00000449110 356 ntBASIC20.46■□□□□ 0.87
GGPS1O95749 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.46■□□□□ 0.87
GGPS1O95749 AL353801.3-201ENST00000609898 542 ntBASIC20.46■□□□□ 0.87
GGPS1O95749 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.46■□□□□ 0.87
GGPS1O95749 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.46■□□□□ 0.87
GGPS1O95749 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
GGPS1O95749 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.45■□□□□ 0.87
GGPS1O95749 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
GGPS1O95749 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GGPS1O95749 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.45■□□□□ 0.86
GGPS1O95749 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GGPS1O95749 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GGPS1O95749 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
GGPS1O95749 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.45■□□□□ 0.86
GGPS1O95749 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GGPS1O95749 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GGPS1O95749 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.45■□□□□ 0.86
GGPS1O95749 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GGPS1O95749 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
GGPS1O95749 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
GGPS1O95749 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
GGPS1O95749 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GGPS1O95749 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GGPS1O95749 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.45■□□□□ 0.86
GGPS1O95749 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.45■□□□□ 0.86
GGPS1O95749 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.45■□□□□ 0.86
GGPS1O95749 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.45■□□□□ 0.86
GGPS1O95749 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GGPS1O95749 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.45■□□□□ 0.86
GGPS1O95749 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.45■□□□□ 0.86
GGPS1O95749 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
GGPS1O95749 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
GGPS1O95749 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
GGPS1O95749 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GGPS1O95749 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GGPS1O95749 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GGPS1O95749 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GGPS1O95749 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
GGPS1O95749 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.44■□□□□ 0.86
GGPS1O95749 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GGPS1O95749 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
GGPS1O95749 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
GGPS1O95749 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.44■□□□□ 0.86
GGPS1O95749 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GGPS1O95749 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GGPS1O95749 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GGPS1O95749 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GGPS1O95749 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
GGPS1O95749 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GGPS1O95749 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
GGPS1O95749 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.44■□□□□ 0.86
GGPS1O95749 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.44■□□□□ 0.86
GGPS1O95749 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.44■□□□□ 0.86
GGPS1O95749 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
GGPS1O95749 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.44■□□□□ 0.86
GGPS1O95749 AC104692.2-201ENST00000603054 253 ntBASIC20.44■□□□□ 0.86
GGPS1O95749 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
GGPS1O95749 LINC01126-201ENST00000623515 1646 ntBASIC20.44■□□□□ 0.86
GGPS1O95749 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
GGPS1O95749 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GGPS1O95749 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GGPS1O95749 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
GGPS1O95749 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GGPS1O95749 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GGPS1O95749 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
GGPS1O95749 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
GGPS1O95749 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.43■□□□□ 0.86
GGPS1O95749 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GGPS1O95749 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.43■□□□□ 0.86
GGPS1O95749 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
GGPS1O95749 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GGPS1O95749 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GGPS1O95749 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GGPS1O95749 AC009078.2-202ENST00000463353 338 ntBASIC20.43■□□□□ 0.86
GGPS1O95749 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.43■□□□□ 0.86
GGPS1O95749 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.43■□□□□ 0.86
GGPS1O95749 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.43■□□□□ 0.86
GGPS1O95749 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
GGPS1O95749 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
GGPS1O95749 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
GGPS1O95749 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms