Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.73■■□□□ 1.07
MBD4O95243 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
MBD4O95243 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.73■■□□□ 1.07
MBD4O95243 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MBD4O95243 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
MBD4O95243 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MBD4O95243 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MBD4O95243 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.73■■□□□ 1.07
MBD4O95243 TSPY12P-201ENST00000421279 868 ntBASIC21.73■■□□□ 1.07
MBD4O95243 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MBD4O95243 AL845331.1-201ENST00000424978 1190 ntBASIC21.73■■□□□ 1.07
MBD4O95243 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.73■■□□□ 1.07
MBD4O95243 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.73■■□□□ 1.07
MBD4O95243 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MBD4O95243 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.73■■□□□ 1.07
MBD4O95243 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.73■■□□□ 1.07
MBD4O95243 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MBD4O95243 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.73■■□□□ 1.07
MBD4O95243 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
MBD4O95243 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MBD4O95243 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MBD4O95243 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MBD4O95243 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
MBD4O95243 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MBD4O95243 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MBD4O95243 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MBD4O95243 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
MBD4O95243 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MBD4O95243 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.72■■□□□ 1.07
MBD4O95243 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.72■■□□□ 1.07
MBD4O95243 DUSP5P1-201ENST00000441325 1139 ntBASIC21.72■■□□□ 1.07
MBD4O95243 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.72■■□□□ 1.07
MBD4O95243 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.72■■□□□ 1.07
MBD4O95243 AP000867.3-201ENST00000524675 377 ntBASIC21.72■■□□□ 1.07
MBD4O95243 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.72■■□□□ 1.07
MBD4O95243 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.72■■□□□ 1.07
MBD4O95243 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MBD4O95243 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.72■■□□□ 1.07
MBD4O95243 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MBD4O95243 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MBD4O95243 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MBD4O95243 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MBD4O95243 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
MBD4O95243 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MBD4O95243 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
MBD4O95243 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MBD4O95243 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
MBD4O95243 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MBD4O95243 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MBD4O95243 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MBD4O95243 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.71■■□□□ 1.07
MBD4O95243 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MBD4O95243 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MBD4O95243 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
MBD4O95243 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.71■■□□□ 1.07
MBD4O95243 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MBD4O95243 AC091607.1-201ENST00000490318 1060 ntBASIC21.71■■□□□ 1.07
MBD4O95243 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.71■■□□□ 1.07
MBD4O95243 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MBD4O95243 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MBD4O95243 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
MBD4O95243 AC132938.6-201ENST00000623828 1655 ntBASIC21.71■■□□□ 1.07
MBD4O95243 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
MBD4O95243 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.71■■□□□ 1.07
MBD4O95243 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
MBD4O95243 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MBD4O95243 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MBD4O95243 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MBD4O95243 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
MBD4O95243 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
MBD4O95243 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.07
MBD4O95243 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
MBD4O95243 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
MBD4O95243 AC009113.1-201ENST00000570267 2443 ntBASIC21.7■■□□□ 1.06
MBD4O95243 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.7■■□□□ 1.06
MBD4O95243 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MBD4O95243 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
MBD4O95243 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MBD4O95243 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
MBD4O95243 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.7■■□□□ 1.06
MBD4O95243 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.7■■□□□ 1.06
MBD4O95243 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
MBD4O95243 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.7■■□□□ 1.06
MBD4O95243 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.7■■□□□ 1.06
MBD4O95243 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MBD4O95243 MIR3652-201ENST00000579335 131 ntBASIC21.7■■□□□ 1.06
MBD4O95243 AP005901.3-202ENST00000581653 237 ntBASIC21.7■■□□□ 1.06
MBD4O95243 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.7■■□□□ 1.06
MBD4O95243 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
MBD4O95243 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.7■■□□□ 1.06
MBD4O95243 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MBD4O95243 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.7■■□□□ 1.06
MBD4O95243 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
MBD4O95243 AC233702.3-201ENST00000578656 1387 ntBASIC21.7■■□□□ 1.06
MBD4O95243 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MBD4O95243 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.7■■□□□ 1.06
MBD4O95243 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MBD4O95243 AC090164.3-201ENST00000610780 2143 ntBASIC21.7■■□□□ 1.06
MBD4O95243 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MBD4O95243 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms