Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.31■□□□□ 0.2
CDRT1O95170 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 AL357033.4-201ENST00000617703 1807 ntBASIC16.31■□□□□ 0.2
CDRT1O95170 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CDRT1O95170 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDRT1O95170 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.31■□□□□ 0.2
CDRT1O95170 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.3■□□□□ 0.2
CDRT1O95170 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.3■□□□□ 0.2
CDRT1O95170 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT1O95170 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CDRT1O95170 AL023806.1-201ENST00000603994 1649 ntBASIC16.3■□□□□ 0.2
CDRT1O95170 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT1O95170 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT1O95170 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT1O95170 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CDRT1O95170 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CDRT1O95170 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CDRT1O95170 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.3■□□□□ 0.2
CDRT1O95170 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CDRT1O95170 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT1O95170 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT1O95170 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CDRT1O95170 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT1O95170 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.3■□□□□ 0.2
CDRT1O95170 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT1O95170 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.3■□□□□ 0.2
CDRT1O95170 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT1O95170 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT1O95170 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT1O95170 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.3■□□□□ 0.2
CDRT1O95170 AL109923.1-201ENST00000618799 583 ntBASIC16.3■□□□□ 0.2
CDRT1O95170 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.3■□□□□ 0.2
CDRT1O95170 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT1O95170 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT1O95170 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CDRT1O95170 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDRT1O95170 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT1O95170 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT1O95170 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CDRT1O95170 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT1O95170 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.3■□□□□ 0.2
CDRT1O95170 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT1O95170 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT1O95170 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT1O95170 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT1O95170 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT1O95170 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.29■□□□□ 0.2
CDRT1O95170 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT1O95170 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CDRT1O95170 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDRT1O95170 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT1O95170 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.29■□□□□ 0.2
CDRT1O95170 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT1O95170 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT1O95170 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.29■□□□□ 0.2
CDRT1O95170 AP001094.4-201ENST00000579008 2176 ntBASIC16.29■□□□□ 0.2
CDRT1O95170 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CDRT1O95170 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT1O95170 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT1O95170 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDRT1O95170 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.29■□□□□ 0.2
CDRT1O95170 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDRT1O95170 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.29■□□□□ 0.2
CDRT1O95170 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.29■□□□□ 0.2
CDRT1O95170 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.29■□□□□ 0.2
CDRT1O95170 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.29■□□□□ 0.2
CDRT1O95170 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.29■□□□□ 0.2
CDRT1O95170 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.29■□□□□ 0.2
CDRT1O95170 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.29■□□□□ 0.2
CDRT1O95170 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT1O95170 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.29■□□□□ 0.2
CDRT1O95170 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.29■□□□□ 0.2
CDRT1O95170 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.29■□□□□ 0.2
CDRT1O95170 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CDRT1O95170 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT1O95170 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT1O95170 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT1O95170 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT1O95170 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT1O95170 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT1O95170 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.29■□□□□ 0.2
CDRT1O95170 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT1O95170 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDRT1O95170 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.29■□□□□ 0.2
CDRT1O95170 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CDRT1O95170 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT1O95170 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDRT1O95170 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT1O95170 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDRT1O95170 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT1O95170 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.29■□□□□ 0.2
CDRT1O95170 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.28■□□□□ 0.2
CDRT1O95170 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms