Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC15.93■□□□□ 0.14
UPK1BO75841 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.93■□□□□ 0.14
UPK1BO75841 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.93■□□□□ 0.14
UPK1BO75841 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
UPK1BO75841 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1BO75841 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.93■□□□□ 0.14
UPK1BO75841 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
UPK1BO75841 AC005052.1-201ENST00000625181 2492 ntBASIC15.93■□□□□ 0.14
UPK1BO75841 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1BO75841 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1BO75841 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1BO75841 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1BO75841 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1BO75841 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.93■□□□□ 0.14
UPK1BO75841 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.93■□□□□ 0.14
UPK1BO75841 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1BO75841 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1BO75841 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
UPK1BO75841 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1BO75841 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1BO75841 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.93■□□□□ 0.14
UPK1BO75841 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
UPK1BO75841 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1BO75841 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1BO75841 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1BO75841 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1BO75841 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1BO75841 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.92■□□□□ 0.14
UPK1BO75841 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1BO75841 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1BO75841 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1BO75841 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1BO75841 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
UPK1BO75841 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
UPK1BO75841 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1BO75841 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC15.92■□□□□ 0.14
UPK1BO75841 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.92■□□□□ 0.14
UPK1BO75841 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1BO75841 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1BO75841 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1BO75841 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
UPK1BO75841 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
UPK1BO75841 PHGDH-209ENST00000641074 1780 ntBASIC15.92■□□□□ 0.14
UPK1BO75841 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1BO75841 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.92■□□□□ 0.14
UPK1BO75841 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1BO75841 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.92■□□□□ 0.14
UPK1BO75841 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1BO75841 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1BO75841 MYLKP1-201ENST00000509077 1580 ntBASIC15.92■□□□□ 0.14
UPK1BO75841 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.92■□□□□ 0.14
UPK1BO75841 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.92■□□□□ 0.14
UPK1BO75841 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1BO75841 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1BO75841 AC007950.2-201ENST00000615045 2347 ntBASIC15.91■□□□□ 0.14
UPK1BO75841 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1BO75841 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
UPK1BO75841 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1BO75841 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1BO75841 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.91■□□□□ 0.14
UPK1BO75841 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1BO75841 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1BO75841 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1BO75841 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15.91■□□□□ 0.14
UPK1BO75841 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
UPK1BO75841 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1BO75841 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
UPK1BO75841 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1BO75841 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1BO75841 AC024257.2-201ENST00000549699 147 ntBASIC15.91■□□□□ 0.14
UPK1BO75841 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.91■□□□□ 0.14
UPK1BO75841 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1BO75841 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1BO75841 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
UPK1BO75841 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.91■□□□□ 0.14
UPK1BO75841 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.91■□□□□ 0.14
UPK1BO75841 AC133963.1-201ENST00000504166 1679 ntBASIC15.91■□□□□ 0.14
UPK1BO75841 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1BO75841 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1BO75841 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1BO75841 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
UPK1BO75841 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1BO75841 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
UPK1BO75841 AL357033.4-201ENST00000617703 1807 ntBASIC15.91■□□□□ 0.14
UPK1BO75841 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1BO75841 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.91■□□□□ 0.14
UPK1BO75841 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1BO75841 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1BO75841 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1BO75841 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.91■□□□□ 0.14
UPK1BO75841 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1BO75841 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1BO75841 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
UPK1BO75841 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
UPK1BO75841 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1BO75841 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1BO75841 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
UPK1BO75841 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.9■□□□□ 0.14
UPK1BO75841 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1BO75841 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms