Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PRAMEF11O60813 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF11O60813 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PRAMEF11O60813 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PRAMEF11O60813 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF11O60813 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF11O60813 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF11O60813 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF11O60813 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.5■□□□□ 0.55
PRAMEF11O60813 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF11O60813 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF11O60813 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF11O60813 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.49■□□□□ 0.55
PRAMEF11O60813 ABALON-201ENST00000629058 1903 ntBASIC18.49■□□□□ 0.55
PRAMEF11O60813 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF11O60813 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF11O60813 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF11O60813 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.49■□□□□ 0.55
PRAMEF11O60813 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF11O60813 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF11O60813 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF11O60813 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF11O60813 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.49■□□□□ 0.55
PRAMEF11O60813 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.49■□□□□ 0.55
PRAMEF11O60813 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.49■□□□□ 0.55
PRAMEF11O60813 IER3-202ENST00000376377 1350 ntBASIC18.49■□□□□ 0.55
PRAMEF11O60813 AL353692.3-201ENST00000407031 1396 ntBASIC18.49■□□□□ 0.55
PRAMEF11O60813 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PRAMEF11O60813 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF11O60813 LINC00602-201ENST00000629776 2065 ntBASIC18.49■□□□□ 0.55
PRAMEF11O60813 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PRAMEF11O60813 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF11O60813 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF11O60813 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.49■□□□□ 0.55
PRAMEF11O60813 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PRAMEF11O60813 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.49■□□□□ 0.55
PRAMEF11O60813 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF11O60813 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF11O60813 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PRAMEF11O60813 AL354751.1-201ENST00000412768 1863 ntBASIC18.48■□□□□ 0.55
PRAMEF11O60813 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF11O60813 AC132938.6-201ENST00000623828 1655 ntBASIC18.48■□□□□ 0.55
PRAMEF11O60813 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF11O60813 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF11O60813 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.48■□□□□ 0.55
PRAMEF11O60813 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF11O60813 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF11O60813 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF11O60813 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PRAMEF11O60813 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
PRAMEF11O60813 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF11O60813 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.48■□□□□ 0.55
PRAMEF11O60813 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.48■□□□□ 0.55
PRAMEF11O60813 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.48■□□□□ 0.55
PRAMEF11O60813 AC091076.1-201ENST00000610741 619 ntBASIC18.48■□□□□ 0.55
PRAMEF11O60813 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.48■□□□□ 0.55
PRAMEF11O60813 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.48■□□□□ 0.55
PRAMEF11O60813 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.48■□□□□ 0.55
PRAMEF11O60813 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF11O60813 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF11O60813 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.48■□□□□ 0.55
PRAMEF11O60813 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF11O60813 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.48■□□□□ 0.55
PRAMEF11O60813 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
PRAMEF11O60813 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF11O60813 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF11O60813 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PRAMEF11O60813 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.48■□□□□ 0.55
PRAMEF11O60813 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.47■□□□□ 0.55
PRAMEF11O60813 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF11O60813 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.47■□□□□ 0.55
PRAMEF11O60813 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
PRAMEF11O60813 NEFHP1-201ENST00000412845 2629 ntBASIC18.47■□□□□ 0.55
PRAMEF11O60813 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF11O60813 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF11O60813 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF11O60813 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF11O60813 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PRAMEF11O60813 TSPY22P-201ENST00000427496 604 ntBASIC18.47■□□□□ 0.55
PRAMEF11O60813 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF11O60813 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.47■□□□□ 0.55
PRAMEF11O60813 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.47■□□□□ 0.55
PRAMEF11O60813 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.47■□□□□ 0.55
PRAMEF11O60813 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PRAMEF11O60813 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.47■□□□□ 0.55
PRAMEF11O60813 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF11O60813 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF11O60813 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF11O60813 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF11O60813 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.47■□□□□ 0.55
PRAMEF11O60813 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.46■□□□□ 0.55
PRAMEF11O60813 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF11O60813 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF11O60813 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF11O60813 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF11O60813 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF11O60813 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF11O60813 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF11O60813 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF11O60813 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms