Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.19■□□□□ 0.18
GMDSO60547 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GMDSO60547 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.19■□□□□ 0.18
GMDSO60547 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
GMDSO60547 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.19■□□□□ 0.18
GMDSO60547 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.19■□□□□ 0.18
GMDSO60547 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GMDSO60547 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
GMDSO60547 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
GMDSO60547 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GMDSO60547 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GMDSO60547 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GMDSO60547 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.19■□□□□ 0.18
GMDSO60547 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GMDSO60547 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GMDSO60547 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GMDSO60547 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.19■□□□□ 0.18
GMDSO60547 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GMDSO60547 PKD1P1-201ENST00000458669 6805 ntBASIC16.19■□□□□ 0.18
GMDSO60547 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
GMDSO60547 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
GMDSO60547 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GMDSO60547 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GMDSO60547 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.18■□□□□ 0.18
GMDSO60547 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GMDSO60547 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.18■□□□□ 0.18
GMDSO60547 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GMDSO60547 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GMDSO60547 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
GMDSO60547 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
GMDSO60547 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.18■□□□□ 0.18
GMDSO60547 AC097488.1-201ENST00000507834 756 ntBASIC16.18■□□□□ 0.18
GMDSO60547 SLC25A1P4-201ENST00000567977 778 ntBASIC16.18■□□□□ 0.18
GMDSO60547 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.18■□□□□ 0.18
GMDSO60547 MIR4497-201ENST00000583208 89 ntBASIC16.18■□□□□ 0.18
GMDSO60547 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.18■□□□□ 0.18
GMDSO60547 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.18■□□□□ 0.18
GMDSO60547 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
GMDSO60547 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.18■□□□□ 0.18
GMDSO60547 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GMDSO60547 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.18■□□□□ 0.18
GMDSO60547 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.18■□□□□ 0.18
GMDSO60547 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GMDSO60547 KRT8P3-201ENST00000519669 1449 ntBASIC16.18■□□□□ 0.18
GMDSO60547 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GMDSO60547 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.18■□□□□ 0.18
GMDSO60547 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.18■□□□□ 0.18
GMDSO60547 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GMDSO60547 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
GMDSO60547 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
GMDSO60547 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.17■□□□□ 0.18
GMDSO60547 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
GMDSO60547 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GMDSO60547 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GMDSO60547 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
GMDSO60547 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GMDSO60547 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GMDSO60547 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.17■□□□□ 0.18
GMDSO60547 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GMDSO60547 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.17■□□□□ 0.18
GMDSO60547 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GMDSO60547 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
GMDSO60547 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.17■□□□□ 0.18
GMDSO60547 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
GMDSO60547 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GMDSO60547 TSPY7P-201ENST00000431358 1114 ntBASIC16.17■□□□□ 0.18
GMDSO60547 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
GMDSO60547 SNORA78-201ENST00000459373 127 ntBASIC16.17■□□□□ 0.18
GMDSO60547 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GMDSO60547 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.17■□□□□ 0.18
GMDSO60547 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GMDSO60547 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.17■□□□□ 0.18
GMDSO60547 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.17■□□□□ 0.18
GMDSO60547 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.17■□□□□ 0.18
GMDSO60547 AC068587.9-201ENST00000641814 219 ntBASIC16.17■□□□□ 0.18
GMDSO60547 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GMDSO60547 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
GMDSO60547 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.17■□□□□ 0.18
GMDSO60547 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
GMDSO60547 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GMDSO60547 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GMDSO60547 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GMDSO60547 AC141586.5-201ENST00000624546 2050 ntBASIC16.17■□□□□ 0.18
GMDSO60547 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GMDSO60547 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GMDSO60547 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GMDSO60547 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
GMDSO60547 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.16■□□□□ 0.18
GMDSO60547 KRT8P32-201ENST00000512863 1461 ntBASIC16.16■□□□□ 0.18
GMDSO60547 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GMDSO60547 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GMDSO60547 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.16■□□□□ 0.18
GMDSO60547 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
GMDSO60547 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.16■□□□□ 0.18
GMDSO60547 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GMDSO60547 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
GMDSO60547 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.16■□□□□ 0.18
GMDSO60547 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GMDSO60547 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.16■□□□□ 0.18
GMDSO60547 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms