Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA12O60330 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA12O60330 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDHGA12O60330 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA12O60330 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA12O60330 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PCDHGA12O60330 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA12O60330 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA12O60330 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA12O60330 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA12O60330 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA12O60330 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA12O60330 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA12O60330 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA12O60330 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA12O60330 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PCDHGA12O60330 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA12O60330 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA12O60330 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PCDHGA12O60330 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHGA12O60330 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHGA12O60330 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHGA12O60330 AC024563.2-201ENST00000603282 481 ntBASIC18.08■□□□□ 0.48
PCDHGA12O60330 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHGA12O60330 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA12O60330 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA12O60330 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
PCDHGA12O60330 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA12O60330 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PCDHGA12O60330 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PCDHGA12O60330 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA12O60330 KRT89P-201ENST00000620027 1478 ntBASIC18.07■□□□□ 0.48
PCDHGA12O60330 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGA12O60330 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
PCDHGA12O60330 MRPL3P1-201ENST00000400109 1033 ntBASIC18.07■□□□□ 0.48
PCDHGA12O60330 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHGA12O60330 AC009065.1-201ENST00000564055 1225 ntBASIC18.07■□□□□ 0.48
PCDHGA12O60330 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PCDHGA12O60330 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHGA12O60330 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGA12O60330 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.07■□□□□ 0.48
PCDHGA12O60330 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA12O60330 AC006333.2-201ENST00000607957 2099 ntBASIC18.07■□□□□ 0.48
PCDHGA12O60330 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA12O60330 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA12O60330 FEM1AP3-201ENST00000403722 1741 ntBASIC18.06■□□□□ 0.48
PCDHGA12O60330 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA12O60330 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA12O60330 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA12O60330 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGA12O60330 HLA-A-201ENST00000376802 1334 ntBASIC18.06■□□□□ 0.48
PCDHGA12O60330 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA12O60330 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA12O60330 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA12O60330 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA12O60330 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA12O60330 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA12O60330 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
PCDHGA12O60330 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA12O60330 SAPCD2P3-201ENST00000455031 850 ntBASIC18.06■□□□□ 0.48
PCDHGA12O60330 AC079776.4-201ENST00000511039 504 ntBASIC18.06■□□□□ 0.48
PCDHGA12O60330 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHGA12O60330 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHGA12O60330 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHGA12O60330 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGA12O60330 AC064862.7-201ENST00000604520 867 ntBASIC18.06■□□□□ 0.48
PCDHGA12O60330 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.06■□□□□ 0.48
PCDHGA12O60330 BX640515.1-201ENST00000617215 977 ntBASIC18.06■□□□□ 0.48
PCDHGA12O60330 REXO1L6P-202ENST00000619970 1078 ntBASIC18.06■□□□□ 0.48
PCDHGA12O60330 AC124864.1-201ENST00000623408 392 ntBASIC18.06■□□□□ 0.48
PCDHGA12O60330 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGA12O60330 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA12O60330 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA12O60330 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
PCDHGA12O60330 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA12O60330 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PCDHGA12O60330 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms