Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.49■□□□□ 0.55
KDELR3O43731 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KDELR3O43731 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.49■□□□□ 0.55
KDELR3O43731 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
KDELR3O43731 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
KDELR3O43731 AC069148.1-201ENST00000608741 768 ntBASIC18.49■□□□□ 0.55
KDELR3O43731 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.49■□□□□ 0.55
KDELR3O43731 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
KDELR3O43731 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KDELR3O43731 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
KDELR3O43731 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KDELR3O43731 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KDELR3O43731 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KDELR3O43731 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KDELR3O43731 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KDELR3O43731 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KDELR3O43731 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KDELR3O43731 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
KDELR3O43731 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
KDELR3O43731 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KDELR3O43731 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KDELR3O43731 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KDELR3O43731 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KDELR3O43731 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KDELR3O43731 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KDELR3O43731 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KDELR3O43731 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.48■□□□□ 0.55
KDELR3O43731 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KDELR3O43731 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.48■□□□□ 0.55
KDELR3O43731 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.48■□□□□ 0.55
KDELR3O43731 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.48■□□□□ 0.55
KDELR3O43731 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KDELR3O43731 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KDELR3O43731 TSSC2-201ENST00000450217 709 ntBASIC18.48■□□□□ 0.55
KDELR3O43731 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.48■□□□□ 0.55
KDELR3O43731 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.48■□□□□ 0.55
KDELR3O43731 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KDELR3O43731 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.48■□□□□ 0.55
KDELR3O43731 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KDELR3O43731 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
KDELR3O43731 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.48■□□□□ 0.55
KDELR3O43731 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KDELR3O43731 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.48■□□□□ 0.55
KDELR3O43731 AL096828.2-201ENST00000567259 1965 ntBASIC18.48■□□□□ 0.55
KDELR3O43731 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
KDELR3O43731 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
KDELR3O43731 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KDELR3O43731 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KDELR3O43731 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KDELR3O43731 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KDELR3O43731 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
KDELR3O43731 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KDELR3O43731 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.47■□□□□ 0.55
KDELR3O43731 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
KDELR3O43731 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KDELR3O43731 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.47■□□□□ 0.55
KDELR3O43731 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.47■□□□□ 0.55
KDELR3O43731 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.47■□□□□ 0.55
KDELR3O43731 AC090616.6-201ENST00000582640 721 ntBASIC18.47■□□□□ 0.55
KDELR3O43731 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.47■□□□□ 0.55
KDELR3O43731 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
KDELR3O43731 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KDELR3O43731 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.47■□□□□ 0.55
KDELR3O43731 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.47■□□□□ 0.55
KDELR3O43731 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KDELR3O43731 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
KDELR3O43731 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KDELR3O43731 BICD1-207ENST00000551848 1962 ntBASIC18.46■□□□□ 0.55
KDELR3O43731 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.46■□□□□ 0.55
KDELR3O43731 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDELR3O43731 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDELR3O43731 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.46■□□□□ 0.55
KDELR3O43731 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KDELR3O43731 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.46■□□□□ 0.55
KDELR3O43731 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDELR3O43731 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDELR3O43731 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDELR3O43731 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
KDELR3O43731 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KDELR3O43731 TSPY12P-201ENST00000421279 868 ntBASIC18.46■□□□□ 0.55
KDELR3O43731 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.46■□□□□ 0.55
KDELR3O43731 CHCHD2P8-201ENST00000429873 447 ntBASIC18.46■□□□□ 0.55
KDELR3O43731 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.46■□□□□ 0.55
KDELR3O43731 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.46■□□□□ 0.55
KDELR3O43731 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KDELR3O43731 GUSBP12-201ENST00000513727 720 ntBASIC18.46■□□□□ 0.55
KDELR3O43731 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.46■□□□□ 0.55
KDELR3O43731 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KDELR3O43731 AC132938.6-201ENST00000623828 1655 ntBASIC18.46■□□□□ 0.55
KDELR3O43731 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KDELR3O43731 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDELR3O43731 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDELR3O43731 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDELR3O43731 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
KDELR3O43731 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
KDELR3O43731 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
KDELR3O43731 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.46■□□□□ 0.55
KDELR3O43731 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDELR3O43731 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.46■□□□□ 0.54
KDELR3O43731 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms