Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2AO43633 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2AO43633 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2AO43633 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2AO43633 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2AO43633 GMCL1P1-201ENST00000463439 1581 ntBASIC20.51■□□□□ 0.87
CHMP2AO43633 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2AO43633 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2AO43633 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2AO43633 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2AO43633 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2AO43633 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CHMP2AO43633 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2AO43633 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
CHMP2AO43633 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.5■□□□□ 0.87
CHMP2AO43633 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2AO43633 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.5■□□□□ 0.87
CHMP2AO43633 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2AO43633 TSSC2-201ENST00000450217 709 ntBASIC20.5■□□□□ 0.87
CHMP2AO43633 KRT8P26-201ENST00000534154 1276 ntBASIC20.5■□□□□ 0.87
CHMP2AO43633 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.5■□□□□ 0.87
CHMP2AO43633 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.5■□□□□ 0.87
CHMP2AO43633 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.5■□□□□ 0.87
CHMP2AO43633 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
CHMP2AO43633 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
CHMP2AO43633 AC092119.3-201ENST00000612618 583 ntBASIC20.5■□□□□ 0.87
CHMP2AO43633 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.5■□□□□ 0.87
CHMP2AO43633 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CHMP2AO43633 AC004263.2-201ENST00000617183 678 ntBASIC20.5■□□□□ 0.87
CHMP2AO43633 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.5■□□□□ 0.87
CHMP2AO43633 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2AO43633 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2AO43633 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2AO43633 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2AO43633 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CHMP2AO43633 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2AO43633 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2AO43633 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2AO43633 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CHMP2AO43633 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2AO43633 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2AO43633 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2AO43633 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2AO43633 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.5■□□□□ 0.87
CHMP2AO43633 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2AO43633 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2AO43633 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2AO43633 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CHMP2AO43633 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP2AO43633 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CHMP2AO43633 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
CHMP2AO43633 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP2AO43633 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.49■□□□□ 0.87
CHMP2AO43633 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP2AO43633 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP2AO43633 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP2AO43633 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.49■□□□□ 0.87
CHMP2AO43633 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CHMP2AO43633 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.49■□□□□ 0.87
CHMP2AO43633 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.49■□□□□ 0.87
CHMP2AO43633 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.49■□□□□ 0.87
CHMP2AO43633 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.49■□□□□ 0.87
CHMP2AO43633 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CHMP2AO43633 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CHMP2AO43633 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CHMP2AO43633 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP2AO43633 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.49■□□□□ 0.87
CHMP2AO43633 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CHMP2AO43633 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP2AO43633 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP2AO43633 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP2AO43633 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.48■□□□□ 0.87
CHMP2AO43633 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP2AO43633 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.48■□□□□ 0.87
CHMP2AO43633 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP2AO43633 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP2AO43633 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP2AO43633 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP2AO43633 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP2AO43633 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP2AO43633 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.48■□□□□ 0.87
CHMP2AO43633 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
CHMP2AO43633 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CHMP2AO43633 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CHMP2AO43633 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP2AO43633 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.48■□□□□ 0.87
CHMP2AO43633 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.48■□□□□ 0.87
CHMP2AO43633 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP2AO43633 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.48■□□□□ 0.87
CHMP2AO43633 HCG4P8-203ENST00000443049 980 ntBASIC20.48■□□□□ 0.87
CHMP2AO43633 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.48■□□□□ 0.87
CHMP2AO43633 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CHMP2AO43633 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.48■□□□□ 0.87
CHMP2AO43633 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP2AO43633 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP2AO43633 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP2AO43633 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.48■□□□□ 0.87
CHMP2AO43633 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.48■□□□□ 0.87
CHMP2AO43633 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP2AO43633 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms