Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS4O43181 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS4O43181 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.49■□□□□ 0.39
NDUFS4O43181 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
NDUFS4O43181 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS4O43181 ABALON-201ENST00000629058 1903 ntBASIC17.49■□□□□ 0.39
NDUFS4O43181 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS4O43181 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.49■□□□□ 0.39
NDUFS4O43181 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.49■□□□□ 0.39
NDUFS4O43181 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.49■□□□□ 0.39
NDUFS4O43181 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS4O43181 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.49■□□□□ 0.39
NDUFS4O43181 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.49■□□□□ 0.39
NDUFS4O43181 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS4O43181 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS4O43181 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.49■□□□□ 0.39
NDUFS4O43181 AL136038.4-201ENST00000603606 1261 ntBASIC17.49■□□□□ 0.39
NDUFS4O43181 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.49■□□□□ 0.39
NDUFS4O43181 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.49■□□□□ 0.39
NDUFS4O43181 AC079602.3-201ENST00000623931 403 ntBASIC17.49■□□□□ 0.39
NDUFS4O43181 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.49■□□□□ 0.39
NDUFS4O43181 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS4O43181 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.49■□□□□ 0.39
NDUFS4O43181 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.49■□□□□ 0.39
NDUFS4O43181 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS4O43181 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS4O43181 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS4O43181 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS4O43181 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS4O43181 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS4O43181 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS4O43181 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.49■□□□□ 0.39
NDUFS4O43181 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS4O43181 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS4O43181 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.48■□□□□ 0.39
NDUFS4O43181 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS4O43181 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
NDUFS4O43181 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS4O43181 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS4O43181 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.48■□□□□ 0.39
NDUFS4O43181 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS4O43181 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.48■□□□□ 0.39
NDUFS4O43181 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS4O43181 AC093677.2-201ENST00000600169 1863 ntBASIC17.48■□□□□ 0.39
NDUFS4O43181 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NDUFS4O43181 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS4O43181 AL390961.4-201ENST00000623958 2535 ntBASIC17.48■□□□□ 0.39
NDUFS4O43181 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.48■□□□□ 0.39
NDUFS4O43181 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS4O43181 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.48■□□□□ 0.39
NDUFS4O43181 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NDUFS4O43181 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS4O43181 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS4O43181 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.48■□□□□ 0.39
NDUFS4O43181 AC092597.1-201ENST00000487352 616 ntBASIC17.48■□□□□ 0.39
NDUFS4O43181 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.48■□□□□ 0.39
NDUFS4O43181 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.48■□□□□ 0.39
NDUFS4O43181 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.48■□□□□ 0.39
NDUFS4O43181 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
NDUFS4O43181 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS4O43181 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.48■□□□□ 0.39
NDUFS4O43181 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS4O43181 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
NDUFS4O43181 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS4O43181 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.48■□□□□ 0.39
NDUFS4O43181 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NDUFS4O43181 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS4O43181 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.48■□□□□ 0.39
NDUFS4O43181 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS4O43181 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS4O43181 AL391807.1-203ENST00000604392 2365 ntBASIC17.47■□□□□ 0.39
NDUFS4O43181 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
NDUFS4O43181 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NDUFS4O43181 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NDUFS4O43181 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS4O43181 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS4O43181 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS4O43181 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS4O43181 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS4O43181 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS4O43181 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS4O43181 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.47■□□□□ 0.39
NDUFS4O43181 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.47■□□□□ 0.39
NDUFS4O43181 AL671277.2-201ENST00000458060 996 ntBASIC17.47■□□□□ 0.39
NDUFS4O43181 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS4O43181 AL590326.2-201ENST00000625139 305 ntBASIC17.47■□□□□ 0.39
NDUFS4O43181 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS4O43181 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS4O43181 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NDUFS4O43181 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.47■□□□□ 0.39
NDUFS4O43181 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS4O43181 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS4O43181 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS4O43181 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS4O43181 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.47■□□□□ 0.39
NDUFS4O43181 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.47■□□□□ 0.39
NDUFS4O43181 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.47■□□□□ 0.39
NDUFS4O43181 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NDUFS4O43181 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NDUFS4O43181 LINC01311-201ENST00000565162 1445 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms