Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC133561.5-201ENST00000635547 218 ntBASIC19.56■□□□□ 0.72
FOXN3O00409 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXN3O00409 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
FOXN3O00409 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN3O00409 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN3O00409 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.56■□□□□ 0.72
FOXN3O00409 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
FOXN3O00409 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN3O00409 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
FOXN3O00409 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN3O00409 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN3O00409 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN3O00409 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN3O00409 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN3O00409 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN3O00409 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN3O00409 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN3O00409 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.55■□□□□ 0.72
FOXN3O00409 AC093010.1-201ENST00000473625 1624 ntBASIC19.55■□□□□ 0.72
FOXN3O00409 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN3O00409 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN3O00409 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.55■□□□□ 0.72
FOXN3O00409 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN3O00409 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN3O00409 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN3O00409 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN3O00409 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.55■□□□□ 0.72
FOXN3O00409 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN3O00409 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.55■□□□□ 0.72
FOXN3O00409 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN3O00409 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
FOXN3O00409 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
FOXN3O00409 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.55■□□□□ 0.72
FOXN3O00409 GCSHP2-201ENST00000560971 527 ntBASIC19.55■□□□□ 0.72
FOXN3O00409 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.55■□□□□ 0.72
FOXN3O00409 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.55■□□□□ 0.72
FOXN3O00409 AC073912.3-201ENST00000624414 853 ntBASIC19.55■□□□□ 0.72
FOXN3O00409 AL157888.1-201ENST00000631930 593 ntBASIC19.55■□□□□ 0.72
FOXN3O00409 AC097493.4-201ENST00000641197 219 ntBASIC19.55■□□□□ 0.72
FOXN3O00409 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN3O00409 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN3O00409 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN3O00409 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN3O00409 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN3O00409 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
FOXN3O00409 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN3O00409 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN3O00409 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN3O00409 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN3O00409 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.54■□□□□ 0.72
FOXN3O00409 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN3O00409 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.54■□□□□ 0.72
FOXN3O00409 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN3O00409 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN3O00409 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN3O00409 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN3O00409 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
FOXN3O00409 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
FOXN3O00409 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.54■□□□□ 0.72
FOXN3O00409 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.54■□□□□ 0.72
FOXN3O00409 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.54■□□□□ 0.72
FOXN3O00409 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.54■□□□□ 0.72
FOXN3O00409 AC092865.7-201ENST00000641832 219 ntBASIC19.54■□□□□ 0.72
FOXN3O00409 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN3O00409 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN3O00409 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN3O00409 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN3O00409 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN3O00409 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN3O00409 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN3O00409 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN3O00409 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
FOXN3O00409 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
FOXN3O00409 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.53■□□□□ 0.72
FOXN3O00409 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN3O00409 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN3O00409 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN3O00409 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN3O00409 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.53■□□□□ 0.72
FOXN3O00409 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.53■□□□□ 0.72
FOXN3O00409 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
FOXN3O00409 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.53■□□□□ 0.72
FOXN3O00409 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
FOXN3O00409 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN3O00409 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN3O00409 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN3O00409 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.53■□□□□ 0.72
FOXN3O00409 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN3O00409 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.53■□□□□ 0.72
FOXN3O00409 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN3O00409 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.53■□□□□ 0.72
FOXN3O00409 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.53■□□□□ 0.72
FOXN3O00409 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.53■□□□□ 0.72
FOXN3O00409 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
FOXN3O00409 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
FOXN3O00409 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.53■□□□□ 0.72
FOXN3O00409 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN3O00409 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN3O00409 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN3O00409 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms