Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DDX39AO00148 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DDX39AO00148 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX39AO00148 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX39AO00148 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
DDX39AO00148 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.5■□□□□ 0.87
DDX39AO00148 TOB2P1-201ENST00000469761 992 ntBASIC20.5■□□□□ 0.87
DDX39AO00148 AP000867.3-201ENST00000524675 377 ntBASIC20.5■□□□□ 0.87
DDX39AO00148 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.5■□□□□ 0.87
DDX39AO00148 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.5■□□□□ 0.87
DDX39AO00148 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DDX39AO00148 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.5■□□□□ 0.87
DDX39AO00148 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX39AO00148 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX39AO00148 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.5■□□□□ 0.87
DDX39AO00148 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX39AO00148 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.5■□□□□ 0.87
DDX39AO00148 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX39AO00148 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX39AO00148 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX39AO00148 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX39AO00148 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX39AO00148 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
DDX39AO00148 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX39AO00148 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX39AO00148 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DDX39AO00148 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.49■□□□□ 0.87
DDX39AO00148 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX39AO00148 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DDX39AO00148 DUSP5P1-201ENST00000441325 1139 ntBASIC20.49■□□□□ 0.87
DDX39AO00148 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.49■□□□□ 0.87
DDX39AO00148 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.49■□□□□ 0.87
DDX39AO00148 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.49■□□□□ 0.87
DDX39AO00148 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX39AO00148 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.49■□□□□ 0.87
DDX39AO00148 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.49■□□□□ 0.87
DDX39AO00148 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.49■□□□□ 0.87
DDX39AO00148 AL592071.1-201ENST00000611956 408 ntBASIC20.49■□□□□ 0.87
DDX39AO00148 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.49■□□□□ 0.87
DDX39AO00148 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX39AO00148 ESPNP-201ENST00000270691 2015 ntBASIC20.49■□□□□ 0.87
DDX39AO00148 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
DDX39AO00148 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DDX39AO00148 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DDX39AO00148 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX39AO00148 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DDX39AO00148 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.48■□□□□ 0.87
DDX39AO00148 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX39AO00148 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DDX39AO00148 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
DDX39AO00148 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.48■□□□□ 0.87
DDX39AO00148 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DDX39AO00148 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX39AO00148 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX39AO00148 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.48■□□□□ 0.87
DDX39AO00148 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.48■□□□□ 0.87
DDX39AO00148 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.48■□□□□ 0.87
DDX39AO00148 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.48■□□□□ 0.87
DDX39AO00148 AC090616.6-201ENST00000582640 721 ntBASIC20.48■□□□□ 0.87
DDX39AO00148 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.48■□□□□ 0.87
DDX39AO00148 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX39AO00148 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
DDX39AO00148 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX39AO00148 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX39AO00148 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DDX39AO00148 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
DDX39AO00148 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.48■□□□□ 0.87
DDX39AO00148 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
DDX39AO00148 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX39AO00148 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DDX39AO00148 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX39AO00148 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
DDX39AO00148 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DDX39AO00148 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX39AO00148 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.48■□□□□ 0.87
DDX39AO00148 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX39AO00148 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX39AO00148 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX39AO00148 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX39AO00148 LINC00602-201ENST00000629776 2065 ntBASIC20.47■□□□□ 0.87
DDX39AO00148 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.47■□□□□ 0.87
DDX39AO00148 GMCL1P1-201ENST00000463439 1581 ntBASIC20.47■□□□□ 0.87
DDX39AO00148 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX39AO00148 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX39AO00148 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX39AO00148 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX39AO00148 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX39AO00148 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
DDX39AO00148 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
DDX39AO00148 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX39AO00148 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX39AO00148 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.47■□□□□ 0.87
DDX39AO00148 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX39AO00148 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX39AO00148 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX39AO00148 GUSBP12-201ENST00000513727 720 ntBASIC20.47■□□□□ 0.87
DDX39AO00148 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.47■□□□□ 0.87
DDX39AO00148 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.47■□□□□ 0.87
DDX39AO00148 MIR3652-201ENST00000579335 131 ntBASIC20.47■□□□□ 0.87
DDX39AO00148 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms