Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LINC00473A8K010 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00473A8K010 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00473A8K010 LINC01126-201ENST00000623515 1646 ntBASIC14.88□□□□□ -0.03
LINC00473A8K010 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LINC00473A8K010 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
LINC00473A8K010 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
LINC00473A8K010 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00473A8K010 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.87□□□□□ -0.03
LINC00473A8K010 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC00473A8K010 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00473A8K010 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC00473A8K010 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LINC00473A8K010 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LINC00473A8K010 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 CCR12P-201ENST00000446203 998 ntBASIC14.87□□□□□ -0.03
LINC00473A8K010 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
LINC00473A8K010 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00473A8K010 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00473A8K010 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC00473A8K010 FITM1-202ENST00000559294 800 ntBASIC14.87□□□□□ -0.03
LINC00473A8K010 MIR4785-201ENST00000585005 73 ntBASIC14.87□□□□□ -0.03
LINC00473A8K010 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.87□□□□□ -0.03
LINC00473A8K010 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LINC00473A8K010 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00473A8K010 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.87□□□□□ -0.03
LINC00473A8K010 AC012317.2-201ENST00000623305 2251 ntBASIC14.87□□□□□ -0.03
LINC00473A8K010 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LINC00473A8K010 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00473A8K010 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00473A8K010 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00473A8K010 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00473A8K010 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.86□□□□□ -0.03
LINC00473A8K010 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LINC00473A8K010 BCL2-203ENST00000589955 5011 ntBASIC14.86□□□□□ -0.03
LINC00473A8K010 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00473A8K010 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00473A8K010 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00473A8K010 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00473A8K010 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LINC00473A8K010 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00473A8K010 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00473A8K010 AC093010.1-201ENST00000473625 1624 ntBASIC14.86□□□□□ -0.03
LINC00473A8K010 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00473A8K010 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00473A8K010 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00473A8K010 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00473A8K010 MIR718-201ENST00000390190 70 ntBASIC14.86□□□□□ -0.03
LINC00473A8K010 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.86□□□□□ -0.03
LINC00473A8K010 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00473A8K010 AC007663.1-201ENST00000438948 1240 ntBASIC14.86□□□□□ -0.03
LINC00473A8K010 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.86□□□□□ -0.03
LINC00473A8K010 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00473A8K010 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
LINC00473A8K010 BX088651.1-201ENST00000540551 451 ntBASIC14.86□□□□□ -0.03
LINC00473A8K010 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.86□□□□□ -0.03
LINC00473A8K010 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00473A8K010 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.86□□□□□ -0.03
LINC00473A8K010 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
LINC00473A8K010 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00473A8K010 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00473A8K010 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00473A8K010 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00473A8K010 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00473A8K010 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
LINC00473A8K010 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00473A8K010 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00473A8K010 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00473A8K010 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00473A8K010 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00473A8K010 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00473A8K010 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.86□□□□□ -0.03
LINC00473A8K010 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms