Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 AP000692.2-201ENST00000608391 879 ntBASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 FAM87A-204ENST00000613235 858 ntBASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 AC046158.3-201ENST00000624947 2558 ntBASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPDYE4A6NLX3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 INGX-201ENST00000359239 846 ntBASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 UPK3BP1-201ENST00000428678 509 ntBASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SPDYE4A6NLX3 BX119927.1-201ENST00000636596 1552 ntBASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 AC091076.1-201ENST00000610741 619 ntBASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 AC130371.2-201ENST00000619443 611 ntBASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 AL161938.1-201ENST00000569833 2180 ntBASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPDYE4A6NLX3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms