Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
LINC01549A6NIU2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01549A6NIU2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01549A6NIU2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01549A6NIU2 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01549A6NIU2 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
LINC01549A6NIU2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01549A6NIU2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01549A6NIU2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
LINC01549A6NIU2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01549A6NIU2 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01549A6NIU2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13□□□□□ -0.33
LINC01549A6NIU2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13□□□□□ -0.33
LINC01549A6NIU2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
LINC01549A6NIU2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LINC01549A6NIU2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01549A6NIU2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 AL357033.4-201ENST00000617703 1807 ntBASIC12.99□□□□□ -0.33
LINC01549A6NIU2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 DUX4L16-201ENST00000555130 1264 ntBASIC12.99□□□□□ -0.33
LINC01549A6NIU2 AL121829.2-201ENST00000620908 328 ntBASIC12.99□□□□□ -0.33
LINC01549A6NIU2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01549A6NIU2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 AL138688.1-201ENST00000624851 1594 ntBASIC12.98□□□□□ -0.33
LINC01549A6NIU2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 CICP6-201ENST00000457191 2729 ntBASIC12.98□□□□□ -0.33
LINC01549A6NIU2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 ABHD17AP6-201ENST00000458502 1044 ntBASIC12.98□□□□□ -0.33
LINC01549A6NIU2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 AL139246.5-201ENST00000606645 996 ntBASIC12.98□□□□□ -0.33
LINC01549A6NIU2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC01549A6NIU2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LINC01549A6NIU2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms