Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 TMPOP1-202ENST00000424642 1267 ntBASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 FAM210CP-201ENST00000445714 574 ntBASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PRAMEF25A6NGN4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 AP000523.1-201ENST00000398242 1049 ntBASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 BX664615.1-201ENST00000443558 458 ntBASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF25A6NGN4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 MIR564-202ENST00000385049 94 ntBASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 NEK4P2-201ENST00000580004 1012 ntBASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms