Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
TCRBV5S1A1TA0A578 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 PCDHB18P-201ENST00000524813 2368 ntBASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
TCRBV5S1A1TA0A578 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 AC134043.2-201ENST00000624206 2238 ntBASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 RNF152P1-201ENST00000397754 604 ntBASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 AC008687.5-201ENST00000593746 558 ntBASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 AC024563.2-201ENST00000603282 481 ntBASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
TCRBV5S1A1TA0A578 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TCRBV5S1A1TA0A578 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.02■□□□□ 0.63
TCRBV5S1A1TA0A578 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 LINC00602-201ENST00000629776 2065 ntBASIC19.01■□□□□ 0.63
TCRBV5S1A1TA0A578 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19■□□□□ 0.63
TCRBV5S1A1TA0A578 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms