Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 AL355312.1-201ENST00000407115 2176 ntBASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.06■□□□□ 0.16
TRDV1A0A1B0GX56 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 MIR564-202ENST00000385049 94 ntBASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 AC073111.5-205ENST00000641717 521 ntBASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
TRDV1A0A1B0GX56 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRDV1A0A1B0GX56 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms