Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 AC093010.1-201ENST00000473625 1624 ntBASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 AC026271.3-201ENST00000571884 352 ntBASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 AC008403.3-201ENST00000598924 454 ntBASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 AC069544.1-201ENST00000609399 999 ntBASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 AL353708.3-201ENST00000610272 989 ntBASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 AC124067.4-201ENST00000519691 2379 ntBASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV27A0A0K0K1C4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 AC009102.3-201ENST00000623118 1491 ntBASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 AC239809.2-201ENST00000415381 517 ntBASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 AP001094.4-201ENST00000579008 2176 ntBASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 SDHAP2-201ENST00000455183 2001 ntBASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV27A0A0K0K1C4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms