Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 PP12613-201ENST00000424958 2230 ntBASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 MCCD1P1-208ENST00000445732 328 ntBASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 AC034236.2-201ENST00000606662 1610 ntBASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 AL118508.1-201ENST00000613502 2345 ntBASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 NKILA-202ENST00000614771 2598 ntBASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBV6-7A0A0A0MS04 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 GMCL1P1-201ENST00000463439 1581 ntBASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 AL139384.1-201ENST00000612143 3047 ntBASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRBV6-7A0A0A0MS04 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 AC022211.2-201ENST00000585075 2527 ntBASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 GPAT2P1-201ENST00000444924 1672 ntBASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 KRT8P50-201ENST00000562022 1438 ntBASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 DGCR10-201ENST00000609839 495 ntBASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 AC011676.5-201ENST00000624864 2660 ntBASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-7A0A0A0MS04 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms