Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 TSPY17P-201ENST00000450329 467 ntBASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 AL355312.1-201ENST00000407115 2176 ntBASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRBV5-3A0A0A0MS03 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV5-3A0A0A0MS03 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV5-3A0A0A0MS03 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV5-3A0A0A0MS03 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
TRBV5-3A0A0A0MS03 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV5-3A0A0A0MS03 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
TRBV5-3A0A0A0MS03 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TRBV5-3A0A0A0MS03 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 FAM201B-201ENST00000458407 597 ntBASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 AP001412.1-201ENST00000608405 714 ntBASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 AC026471.5-201ENST00000615068 467 ntBASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 AC112497.1-201ENST00000624824 639 ntBASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 AC100803.2-201ENST00000562459 1963 ntBASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.08■□□□□ 0.32
TRBV5-3A0A0A0MS03 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRBV5-3A0A0A0MS03 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TRBV5-3A0A0A0MS03 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-3A0A0A0MS03 PCDHA12-202ENST00000613593 2588 ntBASIC17.07■□□□□ 0.32
TRBV5-3A0A0A0MS03 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV5-3A0A0A0MS03 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-3A0A0A0MS03 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRBV5-3A0A0A0MS03 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-3A0A0A0MS03 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-3A0A0A0MS03 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRBV5-3A0A0A0MS03 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV5-3A0A0A0MS03 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-3A0A0A0MS03 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-3A0A0A0MS03 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV5-3A0A0A0MS03 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-3A0A0A0MS03 KRT18P29-201ENST00000397031 1267 ntBASIC17.07■□□□□ 0.32
TRBV5-3A0A0A0MS03 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.07■□□□□ 0.32
TRBV5-3A0A0A0MS03 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV5-3A0A0A0MS03 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-3A0A0A0MS03 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRBV5-3A0A0A0MS03 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV5-3A0A0A0MS03 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-3A0A0A0MS03 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-3A0A0A0MS03 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 AL355355.2-201ENST00000442321 338 ntBASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 GCSHP5-201ENST00000443090 522 ntBASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 UBE2SP1-201ENST00000450587 669 ntBASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms