Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC187A0A096LP49 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC187A0A096LP49 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.27■□□□□ 0.35
CCDC187A0A096LP49 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC187A0A096LP49 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 INTS4P1-201ENST00000438455 1935 ntBASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 MIR940-201ENST00000401276 94 ntBASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 BX842568.4-201ENST00000421222 227 ntBASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 MTCL1P1-201ENST00000446207 792 ntBASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 AL138831.2-201ENST00000606564 490 ntBASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC187A0A096LP49 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCDC187A0A096LP49 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC187A0A096LP49 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC187A0A096LP49 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCDC187A0A096LP49 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC187A0A096LP49 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC187A0A096LP49 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC187A0A096LP49 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCDC187A0A096LP49 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCDC187A0A096LP49 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC187A0A096LP49 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC187A0A096LP49 AC011467.2-201ENST00000598425 242 ntBASIC17.25■□□□□ 0.35
CCDC187A0A096LP49 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC187A0A096LP49 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC187A0A096LP49 AC116407.3-201ENST00000623905 1129 ntBASIC17.25■□□□□ 0.35
CCDC187A0A096LP49 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC187A0A096LP49 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
CCDC187A0A096LP49 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC187A0A096LP49 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC187A0A096LP49 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC187A0A096LP49 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC187A0A096LP49 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC187A0A096LP49 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC187A0A096LP49 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 HNRNPDP1-201ENST00000439535 754 ntBASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 AL024508.2-201ENST00000607749 1894 ntBASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CCDC187A0A096LP49 MYLKP1-201ENST00000509077 1580 ntBASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC187A0A096LP49 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms