Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 AL391807.1-203ENST00000604392 2365 ntBASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 CHCHD2P8-201ENST00000429873 447 ntBASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 AC111152.3-201ENST00000569699 673 ntBASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGA3Q9Y5H0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 HOXB1-202ENST00000577092 1414 ntBASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 RN7SL510P-201ENST00000581311 263 ntBASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 AP002414.4-201ENST00000589764 1148 ntBASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PCDHGA3Q9Y5H0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 FAAHP1-202ENST00000446499 1238 ntBASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA3Q9Y5H0 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms