Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 MIR3180-4-201ENST00000582223 153 ntBASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 AL163051.1-201ENST00000569214 1512 ntBASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB1Q9Y5F3 AC138932.1-201ENST00000534164 6830 ntBASIC18.27■□□□□ 0.52
PCDHB1Q9Y5F3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PCDHB1Q9Y5F3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHB1Q9Y5F3 NEFHP1-201ENST00000412845 2629 ntBASIC18.27■□□□□ 0.52
PCDHB1Q9Y5F3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHB1Q9Y5F3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHB1Q9Y5F3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB1Q9Y5F3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHB1Q9Y5F3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB1Q9Y5F3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB1Q9Y5F3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB1Q9Y5F3 MIR149-201ENST00000384879 89 ntBASIC18.27■□□□□ 0.52
PCDHB1Q9Y5F3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHB1Q9Y5F3 AC246785.2-201ENST00000432512 513 ntBASIC18.27■□□□□ 0.52
PCDHB1Q9Y5F3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB1Q9Y5F3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHB1Q9Y5F3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHB1Q9Y5F3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB1Q9Y5F3 NPAP1P7-201ENST00000613027 823 ntBASIC18.27■□□□□ 0.52
PCDHB1Q9Y5F3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB1Q9Y5F3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB1Q9Y5F3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHB1Q9Y5F3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB1Q9Y5F3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB1Q9Y5F3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB1Q9Y5F3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB1Q9Y5F3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.27■□□□□ 0.51
PCDHB1Q9Y5F3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
PCDHB1Q9Y5F3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 AC104390.1-201ENST00000555663 520 ntBASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 AC009102.3-201ENST00000623118 1491 ntBASIC18.26■□□□□ 0.51
PCDHB1Q9Y5F3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
PCDHB1Q9Y5F3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB1Q9Y5F3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB1Q9Y5F3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB1Q9Y5F3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB1Q9Y5F3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB1Q9Y5F3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB1Q9Y5F3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB1Q9Y5F3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB1Q9Y5F3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB1Q9Y5F3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB1Q9Y5F3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB1Q9Y5F3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB1Q9Y5F3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB1Q9Y5F3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
PCDHB1Q9Y5F3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB1Q9Y5F3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB1Q9Y5F3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB1Q9Y5F3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms