Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 CAND2-206ENST00000626378 333 ntTSL 5 BASIC28.17■■■□□ 2.1
CDK11AQ9UQ88 USP39-202ENST00000409025 1946 ntTSL 5 BASIC28.17■■■□□ 2.1
CDK11AQ9UQ88 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC28.17■■■□□ 2.1
CDK11AQ9UQ88 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC28.17■■■□□ 2.1
CDK11AQ9UQ88 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC28.17■■■□□ 2.1
CDK11AQ9UQ88 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC28.17■■■□□ 2.1
CDK11AQ9UQ88 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CDK11AQ9UQ88 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
CDK11AQ9UQ88 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
CDK11AQ9UQ88 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CDK11AQ9UQ88 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CDK11AQ9UQ88 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
CDK11AQ9UQ88 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CDK11AQ9UQ88 MIR1233-2-201ENST00000408138 82 ntBASIC28.16■■■□□ 2.1
CDK11AQ9UQ88 MIR1233-1-201ENST00000408722 82 ntBASIC28.16■■■□□ 2.1
CDK11AQ9UQ88 BX842568.4-201ENST00000421222 227 ntBASIC28.16■■■□□ 2.1
CDK11AQ9UQ88 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC28.16■■■□□ 2.1
CDK11AQ9UQ88 IGHV3-22-201ENST00000520721 359 ntBASIC28.16■■■□□ 2.1
CDK11AQ9UQ88 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC28.16■■■□□ 2.1
CDK11AQ9UQ88 SART3-203ENST00000546611 1184 ntBASIC28.16■■■□□ 2.1
CDK11AQ9UQ88 CD63-204ENST00000546939 779 ntTSL 3 BASIC28.16■■■□□ 2.1
CDK11AQ9UQ88 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC28.16■■■□□ 2.1
CDK11AQ9UQ88 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC28.16■■■□□ 2.1
CDK11AQ9UQ88 AL049812.1-201ENST00000432563 2267 ntBASIC28.16■■■□□ 2.1
CDK11AQ9UQ88 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 PAM16-208ENST00000573553 722 ntTSL 2 BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 AC099343.3-201ENST00000605834 2503 ntBASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDK11AQ9UQ88 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC28.14■■■□□ 2.1
CDK11AQ9UQ88 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC28.14■■■□□ 2.1
CDK11AQ9UQ88 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CDK11AQ9UQ88 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC28.14■■■□□ 2.1
CDK11AQ9UQ88 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CDK11AQ9UQ88 CTNS-203ENST00000399306 803 ntTSL 3 BASIC28.14■■■□□ 2.1
CDK11AQ9UQ88 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC28.14■■■□□ 2.1
CDK11AQ9UQ88 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC28.14■■■□□ 2.1
CDK11AQ9UQ88 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC28.14■■■□□ 2.1
CDK11AQ9UQ88 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC28.14■■■□□ 2.1
CDK11AQ9UQ88 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CDK11AQ9UQ88 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
CDK11AQ9UQ88 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC28.14■■■□□ 2.09
CDK11AQ9UQ88 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
CDK11AQ9UQ88 LINC01126-201ENST00000623515 1646 ntBASIC28.14■■■□□ 2.09
CDK11AQ9UQ88 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC28.14■■■□□ 2.09
CDK11AQ9UQ88 AL356309.3-201ENST00000624132 1934 ntBASIC28.14■■■□□ 2.09
CDK11AQ9UQ88 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CDK11AQ9UQ88 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CDK11AQ9UQ88 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CDK11AQ9UQ88 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CDK11AQ9UQ88 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CDK11AQ9UQ88 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CDK11AQ9UQ88 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CDK11AQ9UQ88 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC28.13■■■□□ 2.09
CDK11AQ9UQ88 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CDK11AQ9UQ88 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC28.13■■■□□ 2.09
CDK11AQ9UQ88 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC28.13■■■□□ 2.09
CDK11AQ9UQ88 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CDK11AQ9UQ88 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CDK11AQ9UQ88 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC28.13■■■□□ 2.09
CDK11AQ9UQ88 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC28.13■■■□□ 2.09
CDK11AQ9UQ88 ADK-206ENST00000541550 2222 ntTSL 2 BASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 HLA-J-201ENST00000462773 1622 ntBASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms