Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDZRN3Q9UPQ7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDZRN3Q9UPQ7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
PDZRN3Q9UPQ7 AC091304.2-201ENST00000564639 760 ntBASIC23.56■■□□□ 1.36
PDZRN3Q9UPQ7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC23.56■■□□□ 1.36
PDZRN3Q9UPQ7 MIR3180-5-201ENST00000583743 153 ntBASIC23.56■■□□□ 1.36
PDZRN3Q9UPQ7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDZRN3Q9UPQ7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PDZRN3Q9UPQ7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDZRN3Q9UPQ7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
PDZRN3Q9UPQ7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC23.56■■□□□ 1.36
PDZRN3Q9UPQ7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDZRN3Q9UPQ7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDZRN3Q9UPQ7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
PDZRN3Q9UPQ7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC23.55■■□□□ 1.36
PDZRN3Q9UPQ7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDZRN3Q9UPQ7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PDZRN3Q9UPQ7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.55■■□□□ 1.36
PDZRN3Q9UPQ7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
PDZRN3Q9UPQ7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDZRN3Q9UPQ7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC23.55■■□□□ 1.36
PDZRN3Q9UPQ7 GPAT2P1-201ENST00000444924 1672 ntBASIC23.55■■□□□ 1.36
PDZRN3Q9UPQ7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDZRN3Q9UPQ7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC23.55■■□□□ 1.36
PDZRN3Q9UPQ7 SEC1P-202ENST00000473944 940 ntBASIC23.55■■□□□ 1.36
PDZRN3Q9UPQ7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDZRN3Q9UPQ7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC23.55■■□□□ 1.36
PDZRN3Q9UPQ7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDZRN3Q9UPQ7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC23.55■■□□□ 1.36
PDZRN3Q9UPQ7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC23.55■■□□□ 1.36
PDZRN3Q9UPQ7 AC023511.2-201ENST00000618803 211 ntBASIC23.55■■□□□ 1.36
PDZRN3Q9UPQ7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC23.55■■□□□ 1.36
PDZRN3Q9UPQ7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDZRN3Q9UPQ7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDZRN3Q9UPQ7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 AL023284.2-201ENST00000405850 579 ntBASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 EMBP1-201ENST00000458200 901 ntBASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 AC012615.1-201ENST00000565797 1299 ntBASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 AC006538.3-201ENST00000612495 578 ntBASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 AL031008.1-201ENST00000619963 541 ntBASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 AC126763.1-201ENST00000552015 2118 ntBASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDZRN3Q9UPQ7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 AL354751.1-201ENST00000412768 1863 ntBASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 TSPY22P-201ENST00000427496 604 ntBASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 AC009078.2-202ENST00000463353 338 ntBASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 AC106795.1-205ENST00000512851 1056 ntBASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 TPSP2-201ENST00000561760 610 ntBASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 AL136038.4-201ENST00000603606 1261 ntBASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 AC079602.3-201ENST00000623931 403 ntBASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDZRN3Q9UPQ7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms