Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 AC008764.6-201ENST00000595909 2069 ntBASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA9Q9UGM1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 MIR149-201ENST00000384879 89 ntBASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 AC005521.1-201ENST00000393351 872 ntBASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 SEC1P-202ENST00000473944 940 ntBASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 AC010240.3-201ENST00000607688 395 ntBASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA9Q9UGM1 AC009102.3-201ENST00000623118 1491 ntBASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 AL031432.5-201ENST00000641059 760 ntBASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 AC092865.7-201ENST00000641832 219 ntBASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 AC073508.3-201ENST00000619697 1419 ntBASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 ESPNP-201ENST00000270691 2015 ntBASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA9Q9UGM1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms