Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.64■□□□□ 0.57
UBP1Q9NZI7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.64■□□□□ 0.57
UBP1Q9NZI7 AC090340.1-201ENST00000620778 4980 ntBASIC18.64■□□□□ 0.57
UBP1Q9NZI7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
UBP1Q9NZI7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
UBP1Q9NZI7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.64■□□□□ 0.57
UBP1Q9NZI7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.64■□□□□ 0.57
UBP1Q9NZI7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBP1Q9NZI7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBP1Q9NZI7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBP1Q9NZI7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
UBP1Q9NZI7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.64■□□□□ 0.57
UBP1Q9NZI7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
UBP1Q9NZI7 AL162741.1-201ENST00000565563 1558 ntBASIC18.64■□□□□ 0.57
UBP1Q9NZI7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.63■□□□□ 0.57
UBP1Q9NZI7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 TERF1P1-201ENST00000311003 1181 ntBASIC18.63■□□□□ 0.57
UBP1Q9NZI7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 AC005521.1-201ENST00000393351 872 ntBASIC18.63■□□□□ 0.57
UBP1Q9NZI7 AC113347.1-201ENST00000413321 391 ntBASIC18.63■□□□□ 0.57
UBP1Q9NZI7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 AL137013.1-201ENST00000432946 1228 ntBASIC18.63■□□□□ 0.57
UBP1Q9NZI7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 NEK4P2-201ENST00000580004 1012 ntBASIC18.63■□□□□ 0.57
UBP1Q9NZI7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBP1Q9NZI7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 KRT18P57-201ENST00000443599 1254 ntBASIC18.62■□□□□ 0.57
UBP1Q9NZI7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 GCSHP2-201ENST00000560971 527 ntBASIC18.62■□□□□ 0.57
UBP1Q9NZI7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBP1Q9NZI7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 BCL2-203ENST00000589955 5011 ntBASIC18.61■□□□□ 0.57
UBP1Q9NZI7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms