Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CISHQ9NSE2 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CISHQ9NSE2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CISHQ9NSE2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CISHQ9NSE2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CISHQ9NSE2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.48■□□□□ 0.71
CISHQ9NSE2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CISHQ9NSE2 SPDYE13P-201ENST00000445314 798 ntBASIC19.48■□□□□ 0.71
CISHQ9NSE2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.48■□□□□ 0.71
CISHQ9NSE2 VENTXP5-201ENST00000523979 775 ntBASIC19.48■□□□□ 0.71
CISHQ9NSE2 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.48■□□□□ 0.71
CISHQ9NSE2 AL590326.2-201ENST00000625139 305 ntBASIC19.48■□□□□ 0.71
CISHQ9NSE2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CISHQ9NSE2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CISHQ9NSE2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.48■□□□□ 0.71
CISHQ9NSE2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CISHQ9NSE2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CISHQ9NSE2 AL096828.2-201ENST00000567259 1965 ntBASIC19.48■□□□□ 0.71
CISHQ9NSE2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CISHQ9NSE2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CISHQ9NSE2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.48■□□□□ 0.71
CISHQ9NSE2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CISHQ9NSE2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CISHQ9NSE2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.47■□□□□ 0.71
CISHQ9NSE2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CISHQ9NSE2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CISHQ9NSE2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.47■□□□□ 0.71
CISHQ9NSE2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CISHQ9NSE2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CISHQ9NSE2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CISHQ9NSE2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CISHQ9NSE2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CISHQ9NSE2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CISHQ9NSE2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CISHQ9NSE2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.47■□□□□ 0.71
CISHQ9NSE2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.47■□□□□ 0.71
CISHQ9NSE2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.47■□□□□ 0.71
CISHQ9NSE2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.47■□□□□ 0.71
CISHQ9NSE2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
CISHQ9NSE2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.47■□□□□ 0.71
CISHQ9NSE2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.47■□□□□ 0.71
CISHQ9NSE2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CISHQ9NSE2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CISHQ9NSE2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CISHQ9NSE2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.47■□□□□ 0.71
CISHQ9NSE2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CISHQ9NSE2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CISHQ9NSE2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CISHQ9NSE2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.46■□□□□ 0.71
CISHQ9NSE2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CISHQ9NSE2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.46■□□□□ 0.71
CISHQ9NSE2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CISHQ9NSE2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.46■□□□□ 0.71
CISHQ9NSE2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CISHQ9NSE2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CISHQ9NSE2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CISHQ9NSE2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CISHQ9NSE2 MIR662-201ENST00000384847 95 ntBASIC19.46■□□□□ 0.71
CISHQ9NSE2 AL031133.1-201ENST00000406807 723 ntBASIC19.46■□□□□ 0.71
CISHQ9NSE2 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CISHQ9NSE2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.46■□□□□ 0.71
CISHQ9NSE2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.46■□□□□ 0.71
CISHQ9NSE2 ZNF444P1-201ENST00000559497 298 ntBASIC19.46■□□□□ 0.71
CISHQ9NSE2 AC008687.5-201ENST00000593746 558 ntBASIC19.46■□□□□ 0.71
CISHQ9NSE2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CISHQ9NSE2 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.46■□□□□ 0.71
CISHQ9NSE2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.46■□□□□ 0.71
CISHQ9NSE2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CISHQ9NSE2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CISHQ9NSE2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.46■□□□□ 0.71
CISHQ9NSE2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CISHQ9NSE2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CISHQ9NSE2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CISHQ9NSE2 AL390961.4-201ENST00000623958 2535 ntBASIC19.46■□□□□ 0.71
CISHQ9NSE2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CISHQ9NSE2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CISHQ9NSE2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CISHQ9NSE2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CISHQ9NSE2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CISHQ9NSE2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CISHQ9NSE2 REXO1L9P-201ENST00000604264 2108 ntBASIC19.45■□□□□ 0.7
CISHQ9NSE2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CISHQ9NSE2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CISHQ9NSE2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CISHQ9NSE2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CISHQ9NSE2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CISHQ9NSE2 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CISHQ9NSE2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CISHQ9NSE2 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.45■□□□□ 0.7
CISHQ9NSE2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CISHQ9NSE2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.45■□□□□ 0.7
CISHQ9NSE2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.45■□□□□ 0.7
CISHQ9NSE2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.45■□□□□ 0.7
CISHQ9NSE2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.45■□□□□ 0.7
CISHQ9NSE2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.45■□□□□ 0.7
CISHQ9NSE2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.45■□□□□ 0.7
CISHQ9NSE2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.45■□□□□ 0.7
CISHQ9NSE2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.45■□□□□ 0.7
CISHQ9NSE2 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CISHQ9NSE2 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms