Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB16Q9NRJ7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PCDHB16Q9NRJ7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PCDHB16Q9NRJ7 MTMR9LP-203ENST00000426597 1545 ntBASIC15.92■□□□□ 0.14
PCDHB16Q9NRJ7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
PCDHB16Q9NRJ7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
PCDHB16Q9NRJ7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB16Q9NRJ7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB16Q9NRJ7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB16Q9NRJ7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB16Q9NRJ7 KRT16P1-201ENST00000399124 1418 ntBASIC15.92■□□□□ 0.14
PCDHB16Q9NRJ7 KRT8P45-201ENST00000414328 1447 ntBASIC15.92■□□□□ 0.14
PCDHB16Q9NRJ7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PCDHB16Q9NRJ7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
PCDHB16Q9NRJ7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
PCDHB16Q9NRJ7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHB16Q9NRJ7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB16Q9NRJ7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHB16Q9NRJ7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PCDHB16Q9NRJ7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHB16Q9NRJ7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 AC073648.6-201ENST00000641589 218 ntBASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 HTR7P1-201ENST00000538670 1336 ntBASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHB16Q9NRJ7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 AC128676.1-201ENST00000454392 318 ntBASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 AC091390.4-202ENST00000476426 537 ntBASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 MIR4651-201ENST00000582622 73 ntBASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB16Q9NRJ7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms