Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 AC096733.2-201ENST00000609937 1394 ntBASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 AL023284.2-201ENST00000405850 579 ntBASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 AC008040.2-201ENST00000461049 708 ntBASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 AC011506.1-201ENST00000474329 610 ntBASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRCC1Q9NPI7 ESPNP-201ENST00000270691 2015 ntBASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
KRCC1Q9NPI7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 CA15P1-201ENST00000481698 905 ntBASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 AC020916.1-201ENST00000587762 1774 ntBASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
KRCC1Q9NPI7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRCC1Q9NPI7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRCC1Q9NPI7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.78■□□□□ 0.28
KRCC1Q9NPI7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.78■□□□□ 0.28
KRCC1Q9NPI7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.78■□□□□ 0.28
KRCC1Q9NPI7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.78■□□□□ 0.28
KRCC1Q9NPI7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.78■□□□□ 0.28
KRCC1Q9NPI7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRCC1Q9NPI7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRCC1Q9NPI7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
KRCC1Q9NPI7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRCC1Q9NPI7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms