Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC067863.1-201ENST00000494933 530 ntBASIC16.9■□□□□ 0.3
CHD8Q9HCK8 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHD8Q9HCK8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.9■□□□□ 0.3
CHD8Q9HCK8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHD8Q9HCK8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHD8Q9HCK8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHD8Q9HCK8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHD8Q9HCK8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHD8Q9HCK8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHD8Q9HCK8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CHD8Q9HCK8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.9■□□□□ 0.3
CHD8Q9HCK8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHD8Q9HCK8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHD8Q9HCK8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.89■□□□□ 0.3
CHD8Q9HCK8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
CHD8Q9HCK8 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.89■□□□□ 0.3
CHD8Q9HCK8 MIR1909-201ENST00000411312 80 ntBASIC16.89■□□□□ 0.3
CHD8Q9HCK8 AL627223.1-201ENST00000416693 442 ntBASIC16.89■□□□□ 0.3
CHD8Q9HCK8 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.89■□□□□ 0.3
CHD8Q9HCK8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CHD8Q9HCK8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CHD8Q9HCK8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHD8Q9HCK8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHD8Q9HCK8 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.89■□□□□ 0.29
CHD8Q9HCK8 CNN2P2-201ENST00000443536 909 ntBASIC16.89■□□□□ 0.29
CHD8Q9HCK8 CNN2P3-201ENST00000450201 906 ntBASIC16.89■□□□□ 0.29
CHD8Q9HCK8 SPDYE22P-201ENST00000582158 798 ntBASIC16.89■□□□□ 0.29
CHD8Q9HCK8 AL136317.3-201ENST00000618497 906 ntBASIC16.89■□□□□ 0.29
CHD8Q9HCK8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHD8Q9HCK8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHD8Q9HCK8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CHD8Q9HCK8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.89■□□□□ 0.29
CHD8Q9HCK8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHD8Q9HCK8 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.88■□□□□ 0.29
CHD8Q9HCK8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.88■□□□□ 0.29
CHD8Q9HCK8 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 RPS2P32-201ENST00000439199 892 ntBASIC16.88■□□□□ 0.29
CHD8Q9HCK8 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.88■□□□□ 0.29
CHD8Q9HCK8 LINC01126-201ENST00000623515 1646 ntBASIC16.88■□□□□ 0.29
CHD8Q9HCK8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 ADH5P3-201ENST00000433842 1137 ntBASIC16.88■□□□□ 0.29
CHD8Q9HCK8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CHD8Q9HCK8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.87■□□□□ 0.29
CHD8Q9HCK8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.87■□□□□ 0.29
CHD8Q9HCK8 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CHD8Q9HCK8 AC004877.2-201ENST00000623941 599 ntBASIC16.87■□□□□ 0.29
CHD8Q9HCK8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHD8Q9HCK8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.87■□□□□ 0.29
CHD8Q9HCK8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHD8Q9HCK8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHD8Q9HCK8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CHD8Q9HCK8 AC079776.2-201ENST00000641154 1609 ntBASIC16.87■□□□□ 0.29
CHD8Q9HCK8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CHD8Q9HCK8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.87■□□□□ 0.29
CHD8Q9HCK8 COX5BP8-201ENST00000416911 349 ntBASIC16.87■□□□□ 0.29
CHD8Q9HCK8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.87■□□□□ 0.29
CHD8Q9HCK8 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.87■□□□□ 0.29
CHD8Q9HCK8 MIR4751-201ENST00000578027 74 ntBASIC16.87■□□□□ 0.29
CHD8Q9HCK8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHD8Q9HCK8 AL022326.1-202ENST00000641533 845 ntBASIC16.87■□□□□ 0.29
CHD8Q9HCK8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.87■□□□□ 0.29
CHD8Q9HCK8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHD8Q9HCK8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.87■□□□□ 0.29
CHD8Q9HCK8 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHD8Q9HCK8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.87■□□□□ 0.29
CHD8Q9HCK8 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.87■□□□□ 0.29
CHD8Q9HCK8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CHD8Q9HCK8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CHD8Q9HCK8 KRT8P50-201ENST00000562022 1438 ntBASIC16.87■□□□□ 0.29
CHD8Q9HCK8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.87■□□□□ 0.29
CHD8Q9HCK8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CHD8Q9HCK8 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms