Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 AL031284.1-201ENST00000419297 478 ntBASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 AF186996.4-201ENST00000467186 377 ntBASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 AC009533.2-201ENST00000543664 586 ntBASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 AL671883.3-201ENST00000603274 991 ntBASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 AL138831.2-201ENST00000606564 490 ntBASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 IL9RP2-201ENST00000423948 1312 ntBASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPAP3Q9H6T3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPAP3Q9H6T3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPAP3Q9H6T3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPAP3Q9H6T3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPAP3Q9H6T3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPAP3Q9H6T3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPAP3Q9H6T3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RPAP3Q9H6T3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPAP3Q9H6T3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.98■□□□□ 0.95
RPAP3Q9H6T3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.98■□□□□ 0.95
RPAP3Q9H6T3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.98■□□□□ 0.95
RPAP3Q9H6T3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPAP3Q9H6T3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.98■□□□□ 0.95
RPAP3Q9H6T3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.98■□□□□ 0.95
RPAP3Q9H6T3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.98■□□□□ 0.95
RPAP3Q9H6T3 AL355877.3-201ENST00000622820 899 ntBASIC20.98■□□□□ 0.95
RPAP3Q9H6T3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPAP3Q9H6T3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.98■□□□□ 0.95
RPAP3Q9H6T3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPAP3Q9H6T3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 AP001269.4-201ENST00000609611 512 ntBASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 AF228730.7-201ENST00000641842 219 ntBASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RPAP3Q9H6T3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 AC125634.1-201ENST00000438758 1403 ntBASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 INTS4P1-201ENST00000438455 1935 ntBASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 FGFR3P6-201ENST00000457012 610 ntBASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 SLC25A1P1-201ENST00000528351 927 ntBASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 MTDHP3-201ENST00000594186 672 ntBASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms