Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.5■□□□□ 0.07
GSX1Q9H4S2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
GSX1Q9H4S2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 UPF3AP3-201ENST00000420996 769 ntBASIC15.49■□□□□ 0.07
GSX1Q9H4S2 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.49■□□□□ 0.07
GSX1Q9H4S2 PGAM5P1-201ENST00000518923 814 ntBASIC15.49■□□□□ 0.07
GSX1Q9H4S2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.49■□□□□ 0.07
GSX1Q9H4S2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
GSX1Q9H4S2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 NOC2LP1-202ENST00000452600 2235 ntBASIC15.48■□□□□ 0.07
GSX1Q9H4S2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 AC093484.2-201ENST00000580996 2166 ntBASIC15.48■□□□□ 0.07
GSX1Q9H4S2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.48■□□□□ 0.07
GSX1Q9H4S2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.48■□□□□ 0.07
GSX1Q9H4S2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.48■□□□□ 0.07
GSX1Q9H4S2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms