Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AP000974.1-201ENST00000623909 2387 ntBASIC18.91■□□□□ 0.62
RNF38Q9H0F5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 NSUN5P1-202ENST00000421140 1535 ntBASIC18.9■□□□□ 0.62
RNF38Q9H0F5 NSUN5P2-203ENST00000457352 1529 ntBASIC18.9■□□□□ 0.62
RNF38Q9H0F5 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF38Q9H0F5 LINC00602-201ENST00000629776 2065 ntBASIC18.89■□□□□ 0.62
RNF38Q9H0F5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
RNF38Q9H0F5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.89■□□□□ 0.62
RNF38Q9H0F5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
RNF38Q9H0F5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
RNF38Q9H0F5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF38Q9H0F5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF38Q9H0F5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF38Q9H0F5 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF38Q9H0F5 TSPY12P-201ENST00000421279 868 ntBASIC18.89■□□□□ 0.61
RNF38Q9H0F5 AC246785.2-201ENST00000432512 513 ntBASIC18.89■□□□□ 0.61
RNF38Q9H0F5 AC068472.1-201ENST00000474589 881 ntBASIC18.89■□□□□ 0.61
RNF38Q9H0F5 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF38Q9H0F5 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF38Q9H0F5 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.89■□□□□ 0.61
RNF38Q9H0F5 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF38Q9H0F5 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF38Q9H0F5 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF38Q9H0F5 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF38Q9H0F5 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RNF38Q9H0F5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF38Q9H0F5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RNF38Q9H0F5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 AC120498.9-201ENST00000339021 3867 ntBASIC18.88■□□□□ 0.61
RNF38Q9H0F5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 AC026471.1-201ENST00000564629 3026 ntBASIC18.88■□□□□ 0.61
RNF38Q9H0F5 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF38Q9H0F5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF38Q9H0F5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF38Q9H0F5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF38Q9H0F5 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF38Q9H0F5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms