Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
KRTAP4-3Q9BYR4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 AKR1C7P-201ENST00000305623 895 ntBASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 HES2-202ENST00000377836 507 ntTSL 2 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 MRPL3P1-201ENST00000400109 1033 ntBASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 TSPY19P-201ENST00000418461 509 ntBASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 DRAXINP1-201ENST00000437611 948 ntBASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 TSPY18P-201ENST00000441642 509 ntBASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 KRT16P4-201ENST00000453883 522 ntBASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 RN7SL606P-201ENST00000472779 293 ntBASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 KRT18P31-201ENST00000506277 1292 ntBASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 NSUN5P1-202ENST00000421140 1535 ntBASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 NSUN5P2-203ENST00000457352 1529 ntBASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
KRTAP4-3Q9BYR4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms