Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 UBE2SP1-201ENST00000450587 669 ntBASIC10.91□□□□□ -0.66
LIMD2Q9BT23 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 AF186192.3-201ENST00000583427 947 ntBASIC10.91□□□□□ -0.66
LIMD2Q9BT23 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 DGCR10-201ENST00000609839 495 ntBASIC10.91□□□□□ -0.66
LIMD2Q9BT23 AC011298.2-201ENST00000617989 482 ntBASIC10.91□□□□□ -0.66
LIMD2Q9BT23 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LIMD2Q9BT23 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 AC093525.10-201ENST00000625130 1569 ntBASIC10.9□□□□□ -0.66
LIMD2Q9BT23 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 KRT8P41-201ENST00000533985 1514 ntBASIC10.9□□□□□ -0.66
LIMD2Q9BT23 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 MIR4651-201ENST00000582622 73 ntBASIC10.9□□□□□ -0.66
LIMD2Q9BT23 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 AL359736.2-201ENST00000621992 437 ntBASIC10.9□□□□□ -0.66
LIMD2Q9BT23 DECR2-212ENST00000627716 352 ntTSL 2 BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
LIMD2Q9BT23 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
LIMD2Q9BT23 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC10.9□□□□□ -0.67
LIMD2Q9BT23 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC10.9□□□□□ -0.67
LIMD2Q9BT23 RCC2P6-201ENST00000526625 1557 ntBASIC10.9□□□□□ -0.67
LIMD2Q9BT23 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LIMD2Q9BT23 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LIMD2Q9BT23 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms