Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 TPSP2-201ENST00000561760 610 ntBASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 MIR3652-201ENST00000579335 131 ntBASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 Z69720.1-201ENST00000601483 472 ntBASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 AC124864.1-201ENST00000623408 392 ntBASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP1Q96SZ6 LINC01126-201ENST00000623515 1646 ntBASIC18.92■□□□□ 0.62
CDK5RAP1Q96SZ6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP1Q96SZ6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
CDK5RAP1Q96SZ6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP1Q96SZ6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP1Q96SZ6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP1Q96SZ6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP1Q96SZ6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.92■□□□□ 0.62
CDK5RAP1Q96SZ6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CDK5RAP1Q96SZ6 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.92■□□□□ 0.62
CDK5RAP1Q96SZ6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.92■□□□□ 0.62
CDK5RAP1Q96SZ6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.92■□□□□ 0.62
CDK5RAP1Q96SZ6 AC009154.2-201ENST00000621177 724 ntBASIC18.92■□□□□ 0.62
CDK5RAP1Q96SZ6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CDK5RAP1Q96SZ6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP1Q96SZ6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP1Q96SZ6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP1Q96SZ6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.92■□□□□ 0.62
CDK5RAP1Q96SZ6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP1Q96SZ6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 LINC00265-3P-201ENST00000447588 903 ntBASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 AC011840.4-201ENST00000578471 627 ntBASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 TNXA-203ENST00000507684 2038 ntBASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP1Q96SZ6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 KRT18P65-201ENST00000439811 1286 ntBASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 TOB2P1-201ENST00000469761 992 ntBASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 AC012615.1-201ENST00000565797 1299 ntBASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.9■□□□□ 0.62
CDK5RAP1Q96SZ6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms