Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 AC141586.3-201ENST00000562166 1838 ntBASIC15.68■□□□□ 0.1
CITED4Q96RK1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 AL365209.1-201ENST00000624418 6473 ntBASIC15.68■□□□□ 0.1
CITED4Q96RK1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CITED4Q96RK1 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.68■□□□□ 0.1
CITED4Q96RK1 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.68■□□□□ 0.1
CITED4Q96RK1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CITED4Q96RK1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.68■□□□□ 0.1
CITED4Q96RK1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CITED4Q96RK1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CITED4Q96RK1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.68■□□□□ 0.1
CITED4Q96RK1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.68■□□□□ 0.1
CITED4Q96RK1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CITED4Q96RK1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 TSPY6P-201ENST00000448518 926 ntBASIC15.68■□□□□ 0.1
CITED4Q96RK1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 AC083906.2-201ENST00000511578 360 ntBASIC15.68■□□□□ 0.1
CITED4Q96RK1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.68■□□□□ 0.1
CITED4Q96RK1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC15.68■□□□□ 0.1
CITED4Q96RK1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.68■□□□□ 0.1
CITED4Q96RK1 AC231657.2-201ENST00000624556 255 ntBASIC15.68■□□□□ 0.1
CITED4Q96RK1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.68■□□□□ 0.1
CITED4Q96RK1 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 PP12613-201ENST00000424958 2230 ntBASIC15.68■□□□□ 0.1
CITED4Q96RK1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CITED4Q96RK1 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.68■□□□□ 0.1
CITED4Q96RK1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.68■□□□□ 0.1
CITED4Q96RK1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CITED4Q96RK1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CITED4Q96RK1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.67■□□□□ 0.1
CITED4Q96RK1 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CITED4Q96RK1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CITED4Q96RK1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CITED4Q96RK1 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
CITED4Q96RK1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CITED4Q96RK1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CITED4Q96RK1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CITED4Q96RK1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CITED4Q96RK1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CITED4Q96RK1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CITED4Q96RK1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.67■□□□□ 0.1
CITED4Q96RK1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CITED4Q96RK1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CITED4Q96RK1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CITED4Q96RK1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.67■□□□□ 0.1
CITED4Q96RK1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.67■□□□□ 0.1
CITED4Q96RK1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.67■□□□□ 0.1
CITED4Q96RK1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CITED4Q96RK1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.67■□□□□ 0.1
CITED4Q96RK1 RN7SL371P-201ENST00000578099 267 ntBASIC15.67■□□□□ 0.1
CITED4Q96RK1 MFSD11-216ENST00000590393 1141 ntBASIC15.67■□□□□ 0.1
CITED4Q96RK1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.67■□□□□ 0.1
CITED4Q96RK1 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CITED4Q96RK1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CITED4Q96RK1 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CITED4Q96RK1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CITED4Q96RK1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
CITED4Q96RK1 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CITED4Q96RK1 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CITED4Q96RK1 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CITED4Q96RK1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CITED4Q96RK1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CITED4Q96RK1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CITED4Q96RK1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CITED4Q96RK1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CITED4Q96RK1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CITED4Q96RK1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CITED4Q96RK1 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CITED4Q96RK1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CITED4Q96RK1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.66■□□□□ 0.1
CITED4Q96RK1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CITED4Q96RK1 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CITED4Q96RK1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
CITED4Q96RK1 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CITED4Q96RK1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
CITED4Q96RK1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CITED4Q96RK1 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CITED4Q96RK1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms