Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC138028.4-201ENST00000564984 1845 ntBASIC21.64■■□□□ 1.06
NEK1Q96PY6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NEK1Q96PY6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NEK1Q96PY6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NEK1Q96PY6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NEK1Q96PY6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.64■■□□□ 1.05
NEK1Q96PY6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NEK1Q96PY6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.64■■□□□ 1.05
NEK1Q96PY6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.64■■□□□ 1.05
NEK1Q96PY6 AL031432.5-201ENST00000641059 760 ntBASIC21.64■■□□□ 1.05
NEK1Q96PY6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
NEK1Q96PY6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NEK1Q96PY6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NEK1Q96PY6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NEK1Q96PY6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NEK1Q96PY6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NEK1Q96PY6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.64■■□□□ 1.05
NEK1Q96PY6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
NEK1Q96PY6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.64■■□□□ 1.05
NEK1Q96PY6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NEK1Q96PY6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NEK1Q96PY6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NEK1Q96PY6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NEK1Q96PY6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
NEK1Q96PY6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.63■■□□□ 1.05
NEK1Q96PY6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NEK1Q96PY6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
NEK1Q96PY6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NEK1Q96PY6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NEK1Q96PY6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
NEK1Q96PY6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NEK1Q96PY6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NEK1Q96PY6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.63■■□□□ 1.05
NEK1Q96PY6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.63■■□□□ 1.05
NEK1Q96PY6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NEK1Q96PY6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NEK1Q96PY6 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.63■■□□□ 1.05
NEK1Q96PY6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
NEK1Q96PY6 PVRIG2P-201ENST00000435460 978 ntBASIC21.63■■□□□ 1.05
NEK1Q96PY6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NEK1Q96PY6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
NEK1Q96PY6 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.63■■□□□ 1.05
NEK1Q96PY6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.63■■□□□ 1.05
NEK1Q96PY6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.63■■□□□ 1.05
NEK1Q96PY6 AC139887.4-201ENST00000607877 719 ntBASIC21.63■■□□□ 1.05
NEK1Q96PY6 AC011558.1-201ENST00000623459 338 ntBASIC21.63■■□□□ 1.05
NEK1Q96PY6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
NEK1Q96PY6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NEK1Q96PY6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.63■■□□□ 1.05
NEK1Q96PY6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NEK1Q96PY6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.63■■□□□ 1.05
NEK1Q96PY6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NEK1Q96PY6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NEK1Q96PY6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NEK1Q96PY6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NEK1Q96PY6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NEK1Q96PY6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NEK1Q96PY6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.63■■□□□ 1.05
NEK1Q96PY6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.63■■□□□ 1.05
NEK1Q96PY6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NEK1Q96PY6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.62■■□□□ 1.05
NEK1Q96PY6 AL133373.2-201ENST00000623187 2828 ntBASIC21.62■■□□□ 1.05
NEK1Q96PY6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.62■■□□□ 1.05
NEK1Q96PY6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NEK1Q96PY6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
NEK1Q96PY6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NEK1Q96PY6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NEK1Q96PY6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.62■■□□□ 1.05
NEK1Q96PY6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NEK1Q96PY6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NEK1Q96PY6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NEK1Q96PY6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
NEK1Q96PY6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.62■■□□□ 1.05
NEK1Q96PY6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
NEK1Q96PY6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
NEK1Q96PY6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
NEK1Q96PY6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NEK1Q96PY6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.62■■□□□ 1.05
NEK1Q96PY6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NEK1Q96PY6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NEK1Q96PY6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NEK1Q96PY6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
NEK1Q96PY6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
NEK1Q96PY6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NEK1Q96PY6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.62■■□□□ 1.05
NEK1Q96PY6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NEK1Q96PY6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.61■■□□□ 1.05
NEK1Q96PY6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NEK1Q96PY6 NOC2LP2-201ENST00000407594 1944 ntBASIC21.61■■□□□ 1.05
NEK1Q96PY6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.61■■□□□ 1.05
NEK1Q96PY6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NEK1Q96PY6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NEK1Q96PY6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NEK1Q96PY6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NEK1Q96PY6 AC117947.1-201ENST00000427448 529 ntBASIC21.61■■□□□ 1.05
NEK1Q96PY6 KRT18P57-201ENST00000443599 1254 ntBASIC21.61■■□□□ 1.05
NEK1Q96PY6 YBX1P2-201ENST00000489612 999 ntBASIC21.61■■□□□ 1.05
NEK1Q96PY6 AC034232.1-201ENST00000506026 1064 ntBASIC21.61■■□□□ 1.05
NEK1Q96PY6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.61■■□□□ 1.05
NEK1Q96PY6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms