Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF558Q96NG5 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.38■□□□□ 0.69
ZNF558Q96NG5 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.38■□□□□ 0.69
ZNF558Q96NG5 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF558Q96NG5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF558Q96NG5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.38■□□□□ 0.69
ZNF558Q96NG5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
ZNF558Q96NG5 AC125634.1-201ENST00000438758 1403 ntBASIC19.38■□□□□ 0.69
ZNF558Q96NG5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ZNF558Q96NG5 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.38■□□□□ 0.69
ZNF558Q96NG5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.38■□□□□ 0.69
ZNF558Q96NG5 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.38■□□□□ 0.69
ZNF558Q96NG5 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.38■□□□□ 0.69
ZNF558Q96NG5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF558Q96NG5 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.38■□□□□ 0.69
ZNF558Q96NG5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.38■□□□□ 0.69
ZNF558Q96NG5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.38■□□□□ 0.69
ZNF558Q96NG5 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.38■□□□□ 0.69
ZNF558Q96NG5 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.38■□□□□ 0.69
ZNF558Q96NG5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ZNF558Q96NG5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF558Q96NG5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 AC139530.3-201ENST00000620344 690 ntBASIC19.37■□□□□ 0.69
ZNF558Q96NG5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF558Q96NG5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 KRT18P65-201ENST00000439811 1286 ntBASIC19.36■□□□□ 0.69
ZNF558Q96NG5 RPL13AP23-201ENST00000480739 586 ntBASIC19.36■□□□□ 0.69
ZNF558Q96NG5 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF558Q96NG5 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 HNRNPDP1-201ENST00000439535 754 ntBASIC19.35■□□□□ 0.69
ZNF558Q96NG5 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 POLD2P1-201ENST00000511220 997 ntBASIC19.35■□□□□ 0.69
ZNF558Q96NG5 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms