Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS50Q96JG6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS50Q96JG6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS50Q96JG6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS50Q96JG6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
VPS50Q96JG6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.9■□□□□ 0.46
VPS50Q96JG6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS50Q96JG6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.9■□□□□ 0.46
VPS50Q96JG6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
VPS50Q96JG6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
VPS50Q96JG6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS50Q96JG6 FAM87A-204ENST00000613235 858 ntBASIC17.9■□□□□ 0.46
VPS50Q96JG6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS50Q96JG6 AC067852.2-201ENST00000590513 2313 ntBASIC17.9■□□□□ 0.46
VPS50Q96JG6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
VPS50Q96JG6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
VPS50Q96JG6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS50Q96JG6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS50Q96JG6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS50Q96JG6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.9■□□□□ 0.46
VPS50Q96JG6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.9■□□□□ 0.46
VPS50Q96JG6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.9■□□□□ 0.46
VPS50Q96JG6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
VPS50Q96JG6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.89■□□□□ 0.46
VPS50Q96JG6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
VPS50Q96JG6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.89■□□□□ 0.46
VPS50Q96JG6 SDHAP1-207ENST00000440850 2000 ntBASIC17.89■□□□□ 0.46
VPS50Q96JG6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS50Q96JG6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS50Q96JG6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
VPS50Q96JG6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
VPS50Q96JG6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS50Q96JG6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS50Q96JG6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS50Q96JG6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS50Q96JG6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
VPS50Q96JG6 AP000523.1-201ENST00000398242 1049 ntBASIC17.89■□□□□ 0.45
VPS50Q96JG6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS50Q96JG6 AC007663.1-201ENST00000438948 1240 ntBASIC17.89■□□□□ 0.45
VPS50Q96JG6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS50Q96JG6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS50Q96JG6 ABALON-201ENST00000629058 1903 ntBASIC17.89■□□□□ 0.45
VPS50Q96JG6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS50Q96JG6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS50Q96JG6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS50Q96JG6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS50Q96JG6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS50Q96JG6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS50Q96JG6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.89■□□□□ 0.45
VPS50Q96JG6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS50Q96JG6 ANO7L1-203ENST00000602586 1720 ntBASIC17.89■□□□□ 0.45
VPS50Q96JG6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
VPS50Q96JG6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS50Q96JG6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS50Q96JG6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.89■□□□□ 0.45
VPS50Q96JG6 AC092338.2-201ENST00000568827 1415 ntBASIC17.89■□□□□ 0.45
VPS50Q96JG6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
VPS50Q96JG6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS50Q96JG6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS50Q96JG6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS50Q96JG6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
VPS50Q96JG6 KRT8P41-201ENST00000533985 1514 ntBASIC17.88■□□□□ 0.45
VPS50Q96JG6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS50Q96JG6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS50Q96JG6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.88■□□□□ 0.45
VPS50Q96JG6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS50Q96JG6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VPS50Q96JG6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS50Q96JG6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VPS50Q96JG6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.88■□□□□ 0.45
VPS50Q96JG6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS50Q96JG6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.88■□□□□ 0.45
VPS50Q96JG6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS50Q96JG6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
VPS50Q96JG6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.88■□□□□ 0.45
VPS50Q96JG6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VPS50Q96JG6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.88■□□□□ 0.45
VPS50Q96JG6 DUX4L26-201ENST00000489078 1255 ntBASIC17.88■□□□□ 0.45
VPS50Q96JG6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS50Q96JG6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.88■□□□□ 0.45
VPS50Q96JG6 AC010203.1-204ENST00000548782 407 ntBASIC17.88■□□□□ 0.45
VPS50Q96JG6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.88■□□□□ 0.45
VPS50Q96JG6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.88■□□□□ 0.45
VPS50Q96JG6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.88■□□□□ 0.45
VPS50Q96JG6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.88■□□□□ 0.45
VPS50Q96JG6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS50Q96JG6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS50Q96JG6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS50Q96JG6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.88■□□□□ 0.45
VPS50Q96JG6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS50Q96JG6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS50Q96JG6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VPS50Q96JG6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.88■□□□□ 0.45
VPS50Q96JG6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VPS50Q96JG6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.88■□□□□ 0.45
VPS50Q96JG6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS50Q96JG6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS50Q96JG6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS50Q96JG6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
VPS50Q96JG6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms