Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC58Q96CX6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC58Q96CX6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC58Q96CX6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC58Q96CX6 AC099343.3-201ENST00000605834 2503 ntBASIC17.41■□□□□ 0.38
LRRC58Q96CX6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC58Q96CX6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC58Q96CX6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC58Q96CX6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC58Q96CX6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.41■□□□□ 0.38
LRRC58Q96CX6 AC026271.3-201ENST00000571884 352 ntBASIC17.41■□□□□ 0.38
LRRC58Q96CX6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRC58Q96CX6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
LRRC58Q96CX6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC58Q96CX6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LRRC58Q96CX6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC58Q96CX6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRC58Q96CX6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.41■□□□□ 0.38
LRRC58Q96CX6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC58Q96CX6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC58Q96CX6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC58Q96CX6 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.4■□□□□ 0.38
LRRC58Q96CX6 KRT16P1-201ENST00000399124 1418 ntBASIC17.4■□□□□ 0.38
LRRC58Q96CX6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC58Q96CX6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC58Q96CX6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LRRC58Q96CX6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC58Q96CX6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC58Q96CX6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC58Q96CX6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC58Q96CX6 AL023284.2-201ENST00000405850 579 ntBASIC17.4■□□□□ 0.38
LRRC58Q96CX6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
LRRC58Q96CX6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
LRRC58Q96CX6 AL031985.4-201ENST00000642138 673 ntBASIC17.4■□□□□ 0.38
LRRC58Q96CX6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC58Q96CX6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC58Q96CX6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LRRC58Q96CX6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC58Q96CX6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LRRC58Q96CX6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRC58Q96CX6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC58Q96CX6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC58Q96CX6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC58Q96CX6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC58Q96CX6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC58Q96CX6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
LRRC58Q96CX6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
LRRC58Q96CX6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 SDHAP2-201ENST00000455183 2001 ntBASIC17.39■□□□□ 0.37
LRRC58Q96CX6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 KRT18P55-202ENST00000578578 1546 ntBASIC17.39■□□□□ 0.37
LRRC58Q96CX6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRC58Q96CX6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 OR6D1P-202ENST00000641007 5290 ntBASIC17.38■□□□□ 0.37
LRRC58Q96CX6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 AL355802.2-201ENST00000402069 882 ntBASIC17.38■□□□□ 0.37
LRRC58Q96CX6 MCCD1P1-208ENST00000445732 328 ntBASIC17.38■□□□□ 0.37
LRRC58Q96CX6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 RNA5SP413-201ENST00000516373 109 ntBASIC17.38■□□□□ 0.37
LRRC58Q96CX6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms