Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.83■□□□□ 0.61
HLA-CQ95604 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-CQ95604 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.83■□□□□ 0.61
HLA-CQ95604 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
HLA-CQ95604 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-CQ95604 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-CQ95604 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
HLA-CQ95604 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-CQ95604 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.83■□□□□ 0.6
HLA-CQ95604 AC099778.1-201ENST00000568593 1911 ntBASIC18.83■□□□□ 0.6
HLA-CQ95604 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
HLA-CQ95604 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-CQ95604 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.83■□□□□ 0.6
HLA-CQ95604 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-CQ95604 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.83■□□□□ 0.6
HLA-CQ95604 AP000344.2-201ENST00000512987 629 ntBASIC18.83■□□□□ 0.6
HLA-CQ95604 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.83■□□□□ 0.6
HLA-CQ95604 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.83■□□□□ 0.6
HLA-CQ95604 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.83■□□□□ 0.6
HLA-CQ95604 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-CQ95604 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-CQ95604 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.83■□□□□ 0.6
HLA-CQ95604 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-CQ95604 AC009102.3-201ENST00000623118 1491 ntBASIC18.83■□□□□ 0.6
HLA-CQ95604 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
HLA-CQ95604 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.83■□□□□ 0.6
HLA-CQ95604 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.82■□□□□ 0.6
HLA-CQ95604 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-CQ95604 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-CQ95604 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-CQ95604 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-CQ95604 AL139400.1-201ENST00000366220 510 ntBASIC18.82■□□□□ 0.6
HLA-CQ95604 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-CQ95604 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-CQ95604 VN2R19P-201ENST00000442399 1052 ntBASIC18.82■□□□□ 0.6
HLA-CQ95604 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.82■□□□□ 0.6
HLA-CQ95604 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.82■□□□□ 0.6
HLA-CQ95604 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.82■□□□□ 0.6
HLA-CQ95604 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.82■□□□□ 0.6
HLA-CQ95604 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.82■□□□□ 0.6
HLA-CQ95604 AL031432.2-201ENST00000566714 459 ntBASIC18.82■□□□□ 0.6
HLA-CQ95604 AL928711.1-201ENST00000570165 459 ntBASIC18.82■□□□□ 0.6
HLA-CQ95604 MIR4751-201ENST00000578027 74 ntBASIC18.82■□□□□ 0.6
HLA-CQ95604 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.82■□□□□ 0.6
HLA-CQ95604 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-CQ95604 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
HLA-CQ95604 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-CQ95604 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-CQ95604 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-CQ95604 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-CQ95604 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-CQ95604 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-CQ95604 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-CQ95604 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-CQ95604 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-CQ95604 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-CQ95604 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-CQ95604 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-CQ95604 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-CQ95604 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.81■□□□□ 0.6
HLA-CQ95604 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-CQ95604 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-CQ95604 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-CQ95604 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-CQ95604 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.81■□□□□ 0.6
HLA-CQ95604 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-CQ95604 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.81■□□□□ 0.6
HLA-CQ95604 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.81■□□□□ 0.6
HLA-CQ95604 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.81■□□□□ 0.6
HLA-CQ95604 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.81■□□□□ 0.6
HLA-CQ95604 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-CQ95604 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.81■□□□□ 0.6
HLA-CQ95604 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HLA-CQ95604 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.81■□□□□ 0.6
HLA-CQ95604 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-CQ95604 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-CQ95604 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.81■□□□□ 0.6
HLA-CQ95604 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-CQ95604 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-CQ95604 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-CQ95604 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.81■□□□□ 0.6
HLA-CQ95604 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-CQ95604 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-CQ95604 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.81■□□□□ 0.6
HLA-CQ95604 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-CQ95604 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-CQ95604 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-CQ95604 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-CQ95604 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-CQ95604 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-CQ95604 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.8■□□□□ 0.6
HLA-CQ95604 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-CQ95604 PRYP5-201ENST00000451909 266 ntBASIC18.8■□□□□ 0.6
HLA-CQ95604 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-CQ95604 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.8■□□□□ 0.6
HLA-CQ95604 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.8■□□□□ 0.6
HLA-CQ95604 AF228730.6-201ENST00000641497 218 ntBASIC18.8■□□□□ 0.6
HLA-CQ95604 AC084121.3-201ENST00000641716 218 ntBASIC18.8■□□□□ 0.6
HLA-CQ95604 AC105233.6-201ENST00000642093 218 ntBASIC18.8■□□□□ 0.6
HLA-CQ95604 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms