Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
STAG1Q8WVM7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
STAG1Q8WVM7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
STAG1Q8WVM7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
STAG1Q8WVM7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
STAG1Q8WVM7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
STAG1Q8WVM7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
STAG1Q8WVM7 ATP5G2P1-201ENST00000433580 426 ntBASIC21.5■■□□□ 1.03
STAG1Q8WVM7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.5■■□□□ 1.03
STAG1Q8WVM7 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.5■■□□□ 1.03
STAG1Q8WVM7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.5■■□□□ 1.03
STAG1Q8WVM7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.5■■□□□ 1.03
STAG1Q8WVM7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.5■■□□□ 1.03
STAG1Q8WVM7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
STAG1Q8WVM7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
STAG1Q8WVM7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
STAG1Q8WVM7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
STAG1Q8WVM7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
STAG1Q8WVM7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.49■■□□□ 1.03
STAG1Q8WVM7 AL353692.3-201ENST00000407031 1396 ntBASIC21.49■■□□□ 1.03
STAG1Q8WVM7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
STAG1Q8WVM7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
STAG1Q8WVM7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
STAG1Q8WVM7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.49■■□□□ 1.03
STAG1Q8WVM7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
STAG1Q8WVM7 AC093010.1-201ENST00000473625 1624 ntBASIC21.49■■□□□ 1.03
STAG1Q8WVM7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
STAG1Q8WVM7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
STAG1Q8WVM7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
STAG1Q8WVM7 KRT8P26-201ENST00000534154 1276 ntBASIC21.49■■□□□ 1.03
STAG1Q8WVM7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.49■■□□□ 1.03
STAG1Q8WVM7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
STAG1Q8WVM7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.49■■□□□ 1.03
STAG1Q8WVM7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
STAG1Q8WVM7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
STAG1Q8WVM7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.49■■□□□ 1.03
STAG1Q8WVM7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
STAG1Q8WVM7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
STAG1Q8WVM7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
STAG1Q8WVM7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
STAG1Q8WVM7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
STAG1Q8WVM7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
STAG1Q8WVM7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
STAG1Q8WVM7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 HCG4P8-203ENST00000443049 980 ntBASIC21.48■■□□□ 1.03
STAG1Q8WVM7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 AC016734.2-201ENST00000624325 1377 ntBASIC21.48■■□□□ 1.03
STAG1Q8WVM7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
STAG1Q8WVM7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 NPAP1P7-201ENST00000613027 823 ntBASIC21.47■■□□□ 1.03
STAG1Q8WVM7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 AC132938.6-201ENST00000623828 1655 ntBASIC21.47■■□□□ 1.03
STAG1Q8WVM7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
STAG1Q8WVM7 BICD1-207ENST00000551848 1962 ntBASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms