Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRPM4Q8TD43 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRPM4Q8TD43 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRPM4Q8TD43 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRPM4Q8TD43 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TRPM4Q8TD43 KRT18P27-201ENST00000427733 1299 ntBASIC21.56■■□□□ 1.04
TRPM4Q8TD43 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
TRPM4Q8TD43 ALG1L5P-201ENST00000482043 771 ntBASIC21.56■■□□□ 1.04
TRPM4Q8TD43 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
TRPM4Q8TD43 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.56■■□□□ 1.04
TRPM4Q8TD43 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
TRPM4Q8TD43 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC21.56■■□□□ 1.04
TRPM4Q8TD43 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
TRPM4Q8TD43 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.56■■□□□ 1.04
TRPM4Q8TD43 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.56■■□□□ 1.04
TRPM4Q8TD43 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRPM4Q8TD43 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 AL158211.5-201ENST00000623583 2518 ntBASIC21.55■■□□□ 1.04
TRPM4Q8TD43 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRPM4Q8TD43 LINC01126-201ENST00000623515 1646 ntBASIC21.55■■□□□ 1.04
TRPM4Q8TD43 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
TRPM4Q8TD43 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRPM4Q8TD43 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
TRPM4Q8TD43 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRPM4Q8TD43 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRPM4Q8TD43 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.54■■□□□ 1.04
TRPM4Q8TD43 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.54■■□□□ 1.04
TRPM4Q8TD43 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRPM4Q8TD43 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
TRPM4Q8TD43 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
TRPM4Q8TD43 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.54■■□□□ 1.04
TRPM4Q8TD43 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.54■■□□□ 1.04
TRPM4Q8TD43 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.54■■□□□ 1.04
TRPM4Q8TD43 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.54■■□□□ 1.04
TRPM4Q8TD43 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.54■■□□□ 1.04
TRPM4Q8TD43 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.54■■□□□ 1.04
TRPM4Q8TD43 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.54■■□□□ 1.04
TRPM4Q8TD43 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRPM4Q8TD43 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TRPM4Q8TD43 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRPM4Q8TD43 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.54■■□□□ 1.04
TRPM4Q8TD43 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.53■■□□□ 1.04
TRPM4Q8TD43 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRPM4Q8TD43 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.53■■□□□ 1.04
TRPM4Q8TD43 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRPM4Q8TD43 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC21.53■■□□□ 1.04
TRPM4Q8TD43 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRPM4Q8TD43 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TRPM4Q8TD43 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRPM4Q8TD43 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TRPM4Q8TD43 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRPM4Q8TD43 AC073621.1-201ENST00000392730 636 ntBASIC21.53■■□□□ 1.04
TRPM4Q8TD43 MCCD1P2-201ENST00000423228 335 ntBASIC21.53■■□□□ 1.04
TRPM4Q8TD43 HTR5BP-201ENST00000430851 1154 ntBASIC21.53■■□□□ 1.04
TRPM4Q8TD43 KRT18P65-201ENST00000439811 1286 ntBASIC21.53■■□□□ 1.04
TRPM4Q8TD43 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.53■■□□□ 1.04
TRPM4Q8TD43 AC108751.1-201ENST00000490852 363 ntBASIC21.53■■□□□ 1.04
TRPM4Q8TD43 YBX1P5-201ENST00000509441 847 ntBASIC21.53■■□□□ 1.04
TRPM4Q8TD43 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.53■■□□□ 1.04
TRPM4Q8TD43 CFL1-202ENST00000524553 860 ntTSL 2 BASIC21.53■■□□□ 1.04
TRPM4Q8TD43 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.53■■□□□ 1.04
TRPM4Q8TD43 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.53■■□□□ 1.04
TRPM4Q8TD43 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRPM4Q8TD43 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRPM4Q8TD43 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRPM4Q8TD43 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRPM4Q8TD43 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRPM4Q8TD43 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.53■■□□□ 1.04
TRPM4Q8TD43 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRPM4Q8TD43 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.52■■□□□ 1.04
TRPM4Q8TD43 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRPM4Q8TD43 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.52■■□□□ 1.04
TRPM4Q8TD43 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.52■■□□□ 1.04
TRPM4Q8TD43 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRPM4Q8TD43 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRPM4Q8TD43 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms